Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2459 ATGGCTTCCATTGCCATTCTCTCAATCCTTCTCCCTTCCTTACCCTTCATTTTCTTCATCTTCTCTTTCTTTCTCAGATGGAACCCTTATGGGATTCCATGGAATTGGCCTCTTTTCGGAATGATCCCTACACTCGCCATCCATATCCACCGCATTCATGATCGTGTAGCTGAAATCTTACACCAATCTTCTTCCACTTTCTTCTTCCATGGCGTTTGGTTCGCCGATATTGACTTCTTGCTCACAGCCGACCCTTCAAATATTCACCATATAATGAGTGCCAACTTTCAACGGTACCCCAAAGGCCCCGATTTCAAGTATATTTTTGACGTTTTGGGAGATGGGATTTTCAACTCCGACTCCGATTCCTGGAAGAACCAACGCAGAACCGCTCATGCTTTGGTTCGTCATCACAAGTTTCTTCAATTCTTGGAGAAAATTGCGATGAAGAAGGTCGAGGAAGGGTTGGTTCCGGTGCTTCAAAGTGTTTGTGAAAATGGGTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTTTCGTTTGATTCCACTTGTATGTTGGTCACTGGCTTCGACCTCCATAGTTTATCTCTTGATTTCCCTCAAGTTCCGTTTTCCAAAGCCATGGATGATGTCGAGGAAGTGATTTTTCTTCGACACTTTTTTCCTAGAGGAATTTGGGAATTGCAAAAGAAACTCCAATTTGGACAAGCCAAGAGATTGAACGAAGCTTGGAAGATCATAGATGAAACCATCACAAAATTGATGGCCTCCAAAAGAGAAAGCTTGAAGCTGAAGCTGAAGGAAGAGCCAGAAGGAGGAGGAGTCGATTTGATCACATCGTATATTGTAAACAAAGATGATGATGAATTTGGAAAAAACAATGATAAGTTCTTGAGAGACACCGTTTTGAATTTCATGATTGCTGGTCGGGACACTCTAAGTTCAGCTCTCTCATGGTTTTTCTTTTGTCTTTCAAACAATCCAATCGTTGAAGCAAAGATAAGAGAAGAGCTGAAAACAATCATCCCACCAAACGAAGCTCAAGATCAATGGAGAATATTTTCAATTGAAGAGCTGAAGAATCTAGTTTACTTTCATGGAGCCTTATGTGAAACACTTAGACTTTATCCTCCAGTTCCATTTCAACATAAAGTTCCTTCGCAACCTGACATCCTTCCATCAGGTCATCATGTCAATCCCAAAACAAAGATTTTGTTTTCGTTATATGCATTGGGAAGAACGAGTGATGTGTGGGGAGAAGACTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAAAAAGGAAGTATAAAACATGTGCCATCTTACAAATTCTTGGCCTTCAACGCAGGGCCAAGGACTTGCTTGGGAAGAGAAGTGGCTTTCGTTGAGATGAAAATAGTTGCCGCTGCCATTATTCACAACTACAACATTATTCAACAGATAGGGCATAAGGTTGTTCCTAGTGCTTCTATTATTCTTCACATGAAGCATGGATTCAAAGTCAATATTTCAAGAAGATGGTCTTGA 1533 41.1 MASIAILSILLPSLPFIFFIFSFFLRWNPYGIPWNWPLFGMIPTLAIHIHRIHDRVAEILHQSSSTFFFHGVWFADIDFLLTADPSNIHHIMSANFQRYPKGPDFKYIFDVLGDGIFNSDSDSWKNQRRTAHALVRHHKFLQFLEKIAMKKVEEGLVPVLQSVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLDFPQVPFSKAMDDVEEVIFLRHFFPRGIWELQKKLQFGQAKRLNEAWKIIDETITKLMASKRESLKLKLKEEPEGGGVDLITSYIVNKDDDEFGKNNDKFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPIVEAKIREELKTIIPPNEAQDQWRIFSIEELKNLVYFHGALCETLRLYPPVPFQHKVPSQPDILPSGHHVNPKTKILFSLYALGRTSDVWGEDCMEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGREVAFVEMKIVAAAIIHNYNIIQQIGHKVVPSASIILHMKHGFKVNISRRWS 510
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 46028661 46030193 - Lag0012951.1 Lac1g2459 596030
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2459 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac1g2459 510 PANTHER CYTOCHROME P450 20 501 - -
Lac1g2459 510 SUPERFAMILY Cytochrome P450 23 508 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 Gene3D Cytochrome P450 20 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 CDD CYP86A 67 501 - -
Lac1g2459 510 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2459 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2455 Lac-Chr1:46005180 Lac1g2459 Lac-Chr1:46028661 4.20E-196 dispersed
Lac1g2459 Lac-Chr1:46028661 Lac1g2461 Lac-Chr1:46080536 4.70E-256 dispersed
Lac1g2457 Lac-Chr1:46019265 Lac1g2459 Lac-Chr1:46028661 4.70E-107 proximal
Lac1g2458 Lac-Chr1:46020997 Lac1g2459 Lac-Chr1:46028661 1.10E-80 tandem
Lac1g2459 Lac-Chr1:46028661 Lac1g2460 Lac-Chr1:46052859 2.40E-207 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2459 - - - 0.0