Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2523 ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGACTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATCGAAGCTCTGGAGAAGTTTGGAGCAGCACTAATGGAAGTAGATGCTGATGGATCATTGTCATATCCAGACCCTCAGAATAATTCAAAAGATAATTCTGACAAACACTCTCGCCCCAAAGCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTTATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCCAAAAATGTGATGTTAACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTCGATCTTATTGTTTATGCACCTTACCGGTCAGTTGAAGGCTATGTACATGATATGGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCAATAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGGCACAAGGCGCCCCCTTAGCGCACCTTTGTGGTGAGGAAGGTGCGGCCAAGGTGCGCGCCTTAGGCGCCTCTAAGTTAGCATTGGCTGCAGTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGATACCTGGATAGTATTCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTATGAGTGTTTAAATTCAATTGACTCGTGGGTTAATAGATATGCATTTCCGTCAGAAAAGGATTTAAAGCACATAAACAGAAAATTAAGATCTTGCTGGGGACTGGGCTCCAATGACGAGTACACAAATCTCAACAGGGAACAGACAAAAAGGAGAGCCAGCATGTTTACAAATCTAGTTCAAATCCTGTGTAAAATTGTTGCTCATAATCAGGCTGCTGGATGGTACTCAGCCACCCTTGCTTCTGCTGACATCAGCGATATTTCTGGTCAGTAA 1149 41.86 MADFQTSTQRAKWILTPHELVGRYKAANQRAIEALEKFGAALMEVDADGSLSYPDPQNNSKDNSDKHSRPKALSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEELFHENAEMLQMLKETASIEVDKIMLTDAPLLFPPGQAQGAPLAHLCGEEGAAKVRALGASKLALAAVRRSNEVHGVIDFERYLDSILSRQNSAHTISELYECLNSIDSWVNRYAFPSEKDLKHINRKLRSCWGLGSNDEYTNLNREQTKRRASMFTNLVQILCKIVAHNQAAGWYSATLASADISDISGQ 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 46621164 46627995 + Lag0013015.1 Lac1g2523 596094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2523 382 SMART cyclin_7 87 168 IPR013763 -
Lac1g2523 382 FunFam cyclin-H1-1 63 175 - -
Lac1g2523 382 MobiDBLite consensus disorder prediction 51 70 - -
Lac1g2523 382 Gene3D - 63 175 - -
Lac1g2523 382 SUPERFAMILY Cyclin-like 252 325 IPR036915 -
Lac1g2523 382 Pfam Cyclin, N-terminal domain 70 174 IPR006671 -
Lac1g2523 382 SUPERFAMILY Cyclin-like 67 176 IPR036915 -
Lac1g2523 382 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Lac1g2523 382 SUPERFAMILY Cyclin-like 179 237 IPR036915 -
Lac1g2523 382 Gene3D - 177 304 - -
Lac1g2523 382 CDD CYCLIN_AcCycH_rpt2 177 323 - -
Lac1g2523 382 PANTHER CYCLIN 9 328 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)|GO:0006357(InterPro)|GO:0016538(PANTHER)|GO:0016538(InterPro)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2523 K06634 - csv:101220754 562.762