Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2581 ATGGCTGCTTCAAATGGTCAGCCCCAAGTTCATGAACATGGGCAAAGCGGGCATAAGTCTCTCTTACAGAGCGATGCTCTTTATCAATACATACTTCGAACCAGCGTATATCCCAGAGAGCCTGAAGCTCTGAAAGAACTCCGAGAATTAACCGCCAAACACCCATGGAACGTCATGACAACGAGTGCAGATGAAGCGCAGCTGCTCGGCATGCTTCTTAAGCTCATGAACGCCAAGAACACGATGGAGATTGGCGTTTTCACTGGCTACTCTCTGCTTGCAACTGCGCTCTCCCTTCCCCATGATGGCAAGATATTGGCTATGGATACCAATCGTGAAAACTACGAACTGGGTCTCCCTATAATTCAAAAGGCTGGAGTTGCTCATAAGATTGATTTCAAAGAAGGCCCTGCCATGCCCGTTCTCGACCAAATGATCCAAGAGGGAACATATCACGGGACGTTTGACTTTATCTTTGTGGATGCTGACAAGGATAATTACTTGAATTACCACAAGAGGGCTATTGATCTTGTGAAGATTGGTGGCTTGATCGGGTATGACAACACTCTGTGGGCGGGGTCTGTGGCGGCGCCGCCGGATGCCCCTCTTAAAGAGTACATCAAGTATTCCAGAGACTTTCTCTTGGAGTTCAACGAAACATTGGCGGCTGATTGTAGGATTGAGATTTGCCAACTTGCAGTGGGAGATGGGATTACTTTGTGTCGTCGTGTCAGCTGA 738 47.97 MAASNGQPQVHEHGQSGHKSLLQSDALYQYILRTSVYPREPEALKELRELTAKHPWNVMTTSADEAQLLGMLLKLMNAKNTMEIGVFTGYSLLATALSLPHDGKILAMDTNRENYELGLPIIQKAGVAHKIDFKEGPAMPVLDQMIQEGTYHGTFDFIFVDADKDNYLNYHKRAIDLVKIGGLIGYDNTLWAGSVAAPPDAPLKEYIKYSRDFLLEFNETLAADCRIEICQLAVGDGITLCRRVS 245
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 47162329 47163454 + Lag0013073.1 Lac1g2581 596152
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2581 245 Gene3D Vaccinia Virus protein VP39 19 245 IPR029063 -
Lac1g2581 245 Pfam O-methyltransferase 34 244 IPR002935 GO:0008171(InterPro)
Lac1g2581 245 FunFam Caffeoyl-CoA O-methyltransferase 1 13 245 - -
Lac1g2581 245 PANTHER O-METHYLTRANSFERASE-RELATED 16 244 IPR050362 GO:0008757(PANTHER)
Lac1g2581 245 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 20 244 IPR002935 GO:0008171(InterPro)
Lac1g2581 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 243 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2581 Lac-Chr1:47162329 Lac4g1636 Lac-Chr4:35063214 6.40E-110 dispersed
Lac1g2581 Lac-Chr1:47162329 Lac5g2559 Lac-Chr5:44148236 2.90E-110 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2581 K00588 - vvi:100243978 409.838