Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac1g2615 | ATGGAATTAGACACTTACTTCCTCTACTCTTCCCTCTCGTTTCTCTTTCTTCTTTTCGCTTTCAACCTCATCCGTCGATCCCTTCGATTTCGCAACAACTTACCGCCGAGTCCGCCATCTCTTCCGGTCATCGGCCATCTCCATCTCTTGAAAAAGCCACTCCACCGGAATTTCCAGAACCTCTCCGCCAAATATGGCCCTGTTATGTCTCTCCGCCTCGGATCTCGCCTTGCAGTCGTTGTATCCTCTTCGTCGGCGGTGGAGGACTGCTTCACTAAGAACGACGTCGTTCTCGCCAACCGTCCTCGCTTGCTAATCGGCAAATACCTCGGCTACAACTACACTACCATGATTGGGGCTGCGTACGGCGACCACTGGCGGAACCTCCGCCGAATCGGCTCAATCGAAATCTTCTCTTTGTCTCGAATCAACAAATTCGCCGAAATTCGGAGGGACGAAGTGGAGCGATTGGTGCGGAAACTTTCGAGCAATTCGATCCATCAATTCTCGAAAGTAGAAATGCAATCGGCGTTGTTGGAGCTGACGTTCAACATCTCGATGAGAATGGTGGCCGGAAAGAGGTATTACGGCGACGAGGTGACGGACGAGGAAGAGGCGAGGCAGTTCAGGGAGTTGATTAAGCAGATTGTGGCGCTGGGAGGAGTATCAAATCCAGGGGATTTTTTGCCCATTCTGAACTGGATTTCGAAGGGTTTCGAGAGGAAATTGATTCAATTTGGGAAGAAGATGGATGCGTTCTTGCAGGGGCTGATCGACGACCACCTGAGGGAGAAGGAAGAGGGAAGGAACACGATGATCGATCACCTGCTCTCTCTGCAAGAATCGGATCCTGCTCAATACGACGACCAAATAATCAAAGGATTTATACTGGTGTTACTAACTGCTGGGACCGACACATCAGCTGTGACAATGGAATGGGCCTTGTCTCATCTGCTGAACAATCCTGAAGTGTTAAAGAAAGCAAAAGACGAACTAGACACTCAAATTGGACAAGAACGGCTCGTTGAAGAACCAGACATGTCCAAACTACCCTATCTCCAGGGAATCATCTCTGAGACTCTTCGATTGACTCCCGCCGTTCCAATGTTGCTGCCCCATTATGCAGCCAATGACTGCACAATAGGTGGATATAACGTGCCACGTGACACGATGGTACTAGTTAATGCATGGGCCATACATAGGGATCCAAAGGAATGGGAGAATCCCACAAGTTTCGTACCAGAACGATATGAAAATTCGTCAGACGAAGTTAAGGTACACAAGTTGATACCTTTCGGAGTAGGGAGGCGAGCTTGTCCTGGGTATGCTATGGCACAAAGAGTGATGGGTCTAACTTTGGCAACACTGGTTCAGTGCTTCGAGTGGGAGAGAGTTGGAGAAGAAAAAGTGGACATGCACGAGGGTGCTGGTGCCACAATGCCCAAGCTTCTGCCATTGGAGGCTATGTGCAAAGCTCGTCCCATCGTCAACAACCTTTTTGAGGCGTTTCAGGACAAACCAAGCGGAACCGGGTGGCCAGAGGCGGTAGGGACTAAACGGAGCCGGAGGGACTCGGCCTCGGCCATGCCCGACCCCTTAGGTCTTGGCCCGTCATGTTTGCCGGTTTCGTCTATAGGATCCATCTCCCAGCCTTATTTCTGTCTGGTTGTCATCGTCAGCTCCTTGGATCCAAAGGAATGGGAGGAGCCCACAAGTTTCAGACCAGAGCGATATGAAAAGTCAGAAGTGGAGGTACAGAAGTTGGTAGCTTTCGGAGTGGGGAGGCGAGCTTGTCCTGGGTCTGCCATGGCACAAAGGGTTATGGGTCTAACTTTGGCAGCATTGATTCAGTGCTTCGAGTGGGAGAGAATTGGAGAAGAACAAGTCGACATGAATGAGGGGACTGGTGCCACAATGCCCAAGATTGTGCCATTGGAGGCCATGTGTGCAAACCTCGTCCCATCGTGGAAAACTTCTTTCACTGAGAAATAA | 1992 | 50.35 | MELDTYFLYSSLSFLFLLFAFNLIRRSLRFRNNLPPSPPSLPVIGHLHLLKKPLHRNFQNLSAKYGPVMSLRLGSRLAVVVSSSSAVEDCFTKNDVVLANRPRLLIGKYLGYNYTTMIGAAYGDHWRNLRRIGSIEIFSLSRINKFAEIRRDEVERLVRKLSSNSIHQFSKVEMQSALLELTFNISMRMVAGKRYYGDEVTDEEEARQFRELIKQIVALGGVSNPGDFLPILNWISKGFERKLIQFGKKMDAFLQGLIDDHLREKEEGRNTMIDHLLSLQESDPAQYDDQIIKGFILVLLTAGTDTSAVTMEWALSHLLNNPEVLKKAKDELDTQIGQERLVEEPDMSKLPYLQGIISETLRLTPAVPMLLPHYAANDCTIGGYNVPRDTMVLVNAWAIHRDPKEWENPTSFVPERYENSSDEVKVHKLIPFGVGRRACPGYAMAQRVMGLTLATLVQCFEWERVGEEKVDMHEGAGATMPKLLPLEAMCKARPIVNNLFEAFQDKPSGTGWPEAVGTKRSRRDSASAMPDPLGLGPSCLPVSSIGSISQPYFCLVVIVSSLDPKEWEEPTSFRPERYEKSEVEVQKLVAFGVGRRACPGSAMAQRVMGLTLAALIQCFEWERIGEEQVDMNEGTGATMPKIVPLEAMCANLVPSWKTSFTEK | 663 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 47508697 | 47512449 | - | Lag0013107.1 | Lac1g2615 | 596186 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac1g2615 | 663 | SUPERFAMILY | Cytochrome P450 | 35 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | MobiDBLite | consensus disorder prediction | 510 | 529 | - | - | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac1g2615 | 663 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 493 | IPR050651 | - | |
| Lac1g2615 | 663 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | FunFam | Cytochrome P450 family protein | 26 | 496 | - | - | |
| Lac1g2615 | 663 | SUPERFAMILY | Cytochrome P450 | 559 | 646 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 591 | 600 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac1g2615 | 663 | CDD | CYP81 | 66 | 486 | - | - | |
| Lac1g2615 | 663 | Gene3D | Cytochrome P450 | 552 | 646 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | Gene3D | Cytochrome P450 | 20 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | Pfam | Cytochrome P450 | 35 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | Pfam | Cytochrome P450 | 561 | 639 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac1g2615 | 663 | Coils | Coil | 144 | 164 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g2615 | Lac-Chr1:47508697 | Lac9g1255 | Lac-Chr9:29086268 | 3.80E-165 | dispersed | |
| Lac9g1831 | Lac-Chr9:38097327 | Lac1g2615 | Lac-Chr1:47508697 | 2.40E-54 | dispersed | |
| Lac1g2613 | Lac-Chr1:47497584 | Lac1g2615 | Lac-Chr1:47508697 | 3.80E-210 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac1g2615 | K13260 | - | csv:101215449 | 783.867 |