Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2767 ATGTTGAGTGCTAATAATTGTATCCTTGCTATGCAGATGTTTCCGATTGCAGTTATATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAGTACCCGGGGGCTTCCATGTTGTTAGCTGCATTAGCAGTGGAGGCTGGTTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATCAACTATATATGCGACGATGAGGAAATAAAAGCCATATCTTTTTCCAGTTCAAGTTCAACTGGAAAGAACATATATGCCAAGGCAGCTGCTACTGGAAAGCAAGTTCAGTCCAACTTAGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAATGCCCTGGTTGATGCTGGATTTGGTACTGCTGGACAGACAAGTATGGCTATCAACATTGTTGTCTCCGTTGGGAGTTCAATTCTATGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGACAGATCCCAATGCTGACCTTGGTCCTTGGGACATTCCTGTCTTTCTGTTACTACTATGCACAATCGTATTCGACTGTTAAATTAATTGGTTTCCTTGGAGAAAAAAATCCACAGGTGAAAGATCGTTTTTGTACATTAGTTCAAAGTGGCATTGAAGGTGGCGCTAGACTTCTGCTTGACGGTAGAGATATTGTGGTCCCAGGATACGAAAATGGAAATTTTGTTGGTCCTACCATTTTAGCTGATATAACAACCGACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTATAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAAATTCTGGCATTTATGCGAGGAAGTTCCAGAGTGAAGTGGAAGTGGGAATGGTTGGTATAAATGTTGCTGTTCCAGTTCCGTTGCCATCTTCCTTTAATGATAAGTCGGGCCTGGAATTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTTACCAAATATTGGAGTCTCAATGGCGGTGCCTTCACCATCTGACAGACATTTGAAAGCTCGTGCAGTACCTTCGTTGCTTTCAACATCTGAGAAAGATTCACCTGGTGGGCGGCACAGAAGTTTACCCCCGTTGCCTTCCACATCCGAGAGGGATTCACCCAGCGATGCTGTACTTCTGCAAAACCCTCGAATATCTCAGACAGATTTAGCCAATGAAAGAACCACCTCCTCTCCGCCAACTCCTGATAGGGATTTGCATGGTCAGGGACTCTCCCTGATCTCTACTTTGTCATCAGAGGGGGATTTATCCAACCATGATTTGTCTCCTGCTATGCCTTCGGCAGGTGATAGAGATTTACCTGGCCAAGCTATGTCAGTGTCAACATCCCGATCATCTGAGAGACTTTACATACCTCAGAAATCTCATTGGAATGAAGCCCAGCGGGCTGATTCAATTCCATCCACTTCTGAGAGGATCCATGTGCCCTCATCACAGACAAACAACATCAAAGCGCAGGCATCTCGAACAGCTCATCCTGCTTTGGTCTTAGCTGCCGAGGGGTTATATGTGCCTACATCTCATGACAGTATTTGTCTGATAACCAATGGAAATGACAGTTTAGTTCCATCTCAAAGAATCGACAGCATATGTCAATCATCAGAACGGGTATACATGCTAGCAACTTCCCATCTGAACGACAGTATGAGTCAAACATTGCGGAGAACTGATACCTCCCTGTTTTCTTCTTCAGAGAGGCATTATGTGCCTCCCACTTCTTATAGAAGTGACCACATAAGCTTGGCTTCTCGTACCGACATTGCTTTGCAATCAACTTCAGATAGAATGTACTTGTCTAGCTTGTCAGAGAGGGGCGATAATATGGCTTCCGCTGCTTCTCAACAAGCTGAATCTTTAACATCCACTTCAGAGAGAATGTATATACCTCCATTAGTTCATAGAAGTGCAGGCATGCCACAGAAATCGGAATGGTTATGCATTCCCACTCCTGCTGTATCTCAGAGAATGTATCCACAAGGTTCAATAGTTTCAGCAGATGAATTTCAAAGCCAAGAGGCATCATTAACATTGCCTGCATCGCAAAGAATATGA 2151 43.42 MLSANNCILAMQMFPIAVICGNTFVLKPCEKYPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEEIKAISFSSSSSTGKNIYAKAAATGKQVQSNLGGKSHAIIMPDANMEATLNALVDAGFGTAGQTSMAINIVVSVGSSILWEEKLVECAKALKVNVGQIPMLTLVLGTFLSFCYYYAQSYSTVKLIGFLGEKNPQVKDRFCTLVQSGIEGGARLLLDGRDIVVPGYENGNFVGPTILADITTDMECYKEEFFGPVLLCMQADNLEEAISIINRNKNRNGASIFTNSGIYARKFQSEVEVGMVGINVAVPVPLPSSFNDKSGLEFYTQLKRVAQQWKNLPNIGVSMAVPSPSDRHLKARAVPSLLSTSEKDSPGGRHRSLPPLPSTSERDSPSDAVLLQNPRISQTDLANERTTSSPPTPDRDLHGQGLSLISTLSSEGDLSNHDLSPAMPSAGDRDLPGQAMSVSTSRSSERLYIPQKSHWNEAQRADSIPSTSERIHVPSSQTNNIKAQASRTAHPALVLAAEGLYVPTSHDSICLITNGNDSLVPSQRIDSICQSSERVYMLATSHLNDSMSQTLRRTDTSLFSSSERHYVPPTSYRSDHISLASRTDIALQSTSDRMYLSSLSERGDNMASAASQQAESLTSTSERMYIPPLVHRSAGMPQKSEWLCIPTPAVSQRMYPQGSIVSADEFQSQEASLTLPASQRI 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48807735 48814637 + Lag0013259.1 Lac1g2767 596338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2767 716 Pfam Aldehyde dehydrogenase family 205 319 IPR015590 GO:0016491(InterPro)
Lac1g2767 716 Pfam Aldehyde dehydrogenase family 7 164 IPR015590 GO:0016491(InterPro)
Lac1g2767 716 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 195 326 - -
Lac1g2767 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 103 IPR016162 GO:0016491(InterPro)
Lac1g2767 716 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 9 357 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Lac1g2767 716 MobiDBLite consensus disorder prediction 469 519 - -
Lac1g2767 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 104 324 IPR016163 GO:0016620(InterPro)
Lac1g2767 716 MobiDBLite consensus disorder prediction 437 451 - -
Lac1g2767 716 SUPERFAMILY ALDH-like 8 346 IPR016161 GO:0016491(InterPro)
Lac1g2767 716 MobiDBLite consensus disorder prediction 392 429 - -
Lac1g2767 716 MobiDBLite consensus disorder prediction 373 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0096 Lac-Chr12:1123321 Lac1g2767 Lac-Chr1:48807735 1.80E-109 dispersed
Lac1g2767 Lac-Chr1:48807735 Lac6g1384 Lac-Chr6:14939258 4.60E-23 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2767 K00140 - csv:101207178 1048.11