Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2774 ATGGATGAAGACGATGGGAAAAAAGTCTTCGCCGGAACTTTGAAAATCCGCTACAAACTTTCGAGAAAAGGTTCAAATCCAAACCATCCTTCTCTTCACCTTTTTCGCCACGATTTGAGGAAGCCATTGGCAACTCGTTTGCAGAGACACAATCGAGGCACAAGCCTCGTTGATAATCAATCAATGAACGGCAAAGCAGAGAAGGTCTACGTTGCTATCGGGAATGATCTTCACGATGGTTTCAAGACCTTGGGGTGGACTCTTAGGAAATGGAAGTCTCAACCAATTTCAATTGTGATTCTTCACGTCGCCTACACCAATTCCCGGGAATATGTCTACACTCCATTCGGCAAGCTCCCTGCGAGTTCTGTAAGTGAGGAGAAAGTGGAAGTTCTGAGGAGATATGAGCAGGAAAAGATCGACAAGCTACTTTCTAAATATGTAGATTTCTGTGGCAAGGTAAAAGCCGAAATTCTCAAGGTTGAGAAATCTGATGAACCTGTTCATAAGCTCCTTGTTGACTTGATTTCAGAATTGGGGATAACCAATTTGGTCATTGGCTTTACGTTTATGAAATCCTCATCTTGGAAATCGAAGAATGCAATTAGTGGATCATTCTACATTTACAGAAACAAGGCCCATTTTTGCGAGTTGTTTGTAATATGGGGAGGAAAACAGGTATTTCTCAGAGATGAAAGAATCATGGAAGATGATAAAGGTGTAAGGATTGCTAAAATCAGCTCGAAACACTCATTAAAGGGTTGGCTTGGAAGGATCTTCGTAGAAGACCCGAACTATTACTCAGAAAGGAATTTGAGTCTCTCGTCTGCTTCACCAAGTAGTTCAAATTCCTCTAGTTCTCGAAATTATTGGGACAGTAATGTCCATGAACTTGAGAACTACTATGAGGAATTACTGTCATTGAATTTGCAGTTGGAAGAAGACTGTGAGCAGGATCAAGATGGTGGCCTTGAAAGTTCAGGTTCAACCCAGTTCAATGTTCTTGATCATCCGGATTCAAATATGAATGCTGAGGAAAGAATTGAGCATCTGAGGACTAAAATTGAGGAAGCTCGCAAGACCATCCAATTGATGAAAGATGAAGCAAAGGGCAGTGCTGAAAGGCAAGCTAAAGCAGAGTGGGCCATTAACTTGTGTAGTCAGCGGACCGAAGAGCTTGAAGCTCAGATAAAAGAAGAGGTTACAGTCAGAGAAGAGTTGAAGAAAGAATTAGACTCTACCAAAGAATACATCCTGGAAATAGTAGGTGATATCGAGGAAAGCAAGATCAGATTAAGTTCACTTCTCGAACTCCAATCTGAGCTATCAAGCAAGCTCCAAATTTCCACAGTAGGAAAATCGCGTATAGAGGCTCAATTGGAGAAGACAGCGAAAACAAGAGAGGGGATGGTGAGAGAAATCGAGGAGCTGAGGAGACAGAGAGACATTCTTCACCGAAGAATTGAGTTCTGTAAAGAGAAAGATGCCATTGGAATGGCCGAAAGGTTAACTGAAGTGTCTTGTAGTACAAGAATGTACACGGCGGAAGAGATCAGATCAGCTACTGATAGCTTTTCAGAACAAATGAGATTGAGTTCCCAAGTGTATAGAGGACGTATCAACCATACCTCAGTTGCAATCCGAATGATCGACTCAGGAAATCGACTGTCAGAAGAAGATTTCCAATCTAAGGTGGAGCTTTTAAGCAATATCCGTCACCCTCATCTGATTGCCATTATGGGATTCTGCTCCGAGTTCAAATGCATTGTCTTCGATTACATGCATGGTGGTAGCTTAAGTGACAGACTACTTCCTTCCAACAAAAGATCCAGGAAAATATGCCGCTCTCTCATGTGGCATGATAGAATCCGTATAGCATCAGAGGTATGCTCAGGCTTGAGCTTCCTTCACCAGGCCCAACCTCAGCCCATTTCTCATGGCAACCTCACCCTGTCCAAAATTCTCCTGGACCAAAACCTTGTTGCCAAAATCACTGGCTCTGGGCTCGTCGAATTGGATGAAGCTGGTGGTATTGAATTGGACATTCGGGCTTTTGGGGCTCTACTGCTCCATCTTGTAACCGGGAGGAATTGGGAAGGGCTGGTTGAAAAGGGATTGACGATGGGTAAGGTGGGTCTGGTGCAGATTCTAGACGATAAGGCTGGAAAGTGGCCATTGGACTTGGTTGAAGCGCTAGTTGATCTGGCTTTGAGATGTGTAACTCCAAATGGATCCAATTCAGAGGTTAATTTGCGGACGGCCATGGAAGAGATCGATGAGATCAAGAGGAGAGCAGATGATCTGGTGGAAAATGGAAGGCATGCGGGAGGGACTGAAGGTGCAGATGCAGCTAATGCGGACGTTGATGATGTTCCAAGACCATTCATCTGCCCCATATTGCAGGAAGTGATGAAGAACCCACACGTGGCAGCAGATGGGTTTTCGTACGAGCTAGAGGCCATAGAACAATGGATAATTGCTGGACACGATACATCACCAATGACCAACTTGAGGTTGCAGCACCCTTATCTCACTCCTAATCACACTCTTCGCTCTCTAATTCAAGACTGGCAAAATGAGACCTCAAATGTTTACACATCTTAG 2604 43.86 MDEDDGKKVFAGTLKIRYKLSRKGSNPNHPSLHLFRHDLRKPLATRLQRHNRGTSLVDNQSMNGKAEKVYVAIGNDLHDGFKTLGWTLRKWKSQPISIVILHVAYTNSREYVYTPFGKLPASSVSEEKVEVLRRYEQEKIDKLLSKYVDFCGKVKAEILKVEKSDEPVHKLLVDLISELGITNLVIGFTFMKSSSWKSKNAISGSFYIYRNKAHFCELFVIWGGKQVFLRDERIMEDDKGVRIAKISSKHSLKGWLGRIFVEDPNYYSERNLSLSSASPSSSNSSSSRNYWDSNVHELENYYEELLSLNLQLEEDCEQDQDGGLESSGSTQFNVLDHPDSNMNAEERIEHLRTKIEEARKTIQLMKDEAKGSAERQAKAEWAINLCSQRTEELEAQIKEEVTVREELKKELDSTKEYILEIVGDIEESKIRLSSLLELQSELSSKLQISTVGKSRIEAQLEKTAKTREGMVREIEELRRQRDILHRRIEFCKEKDAIGMAERLTEVSCSTRMYTAEEIRSATDSFSEQMRLSSQVYRGRINHTSVAIRMIDSGNRLSEEDFQSKVELLSNIRHPHLIAIMGFCSEFKCIVFDYMHGGSLSDRLLPSNKRSRKICRSLMWHDRIRIASEVCSGLSFLHQAQPQPISHGNLTLSKILLDQNLVAKITGSGLVELDEAGGIELDIRAFGALLLHLVTGRNWEGLVEKGLTMGKVGLVQILDDKAGKWPLDLVEALVDLALRCVTPNGSNSEVNLRTAMEEIDEIKRRADDLVENGRHAGGTEGADAANADVDDVPRPFICPILQEVMKNPHVAADGFSYELEAIEQWIIAGHDTSPMTNLRLQHPYLTPNHTLRSLIQDWQNETSNVYTS 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48855125 48858798 + Lag0013266.1 Lac1g2774 596345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2774 867 Coils Coil 295 315 - -
Lac1g2774 867 Gene3D Phosphorylase Kinase; domain 1 498 593 - -
Lac1g2774 867 SMART Ubox_2 794 857 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Lac1g2774 867 ProSiteProfiles Protein kinase domain profile. 514 867 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g2774 867 MobiDBLite consensus disorder prediction 317 338 - -
Lac1g2774 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 789 865 IPR013083 -
Lac1g2774 867 ProSiteProfiles U-box domain profile. 790 864 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Lac1g2774 867 Coils Coil 751 771 - -
Lac1g2774 867 Coils Coil 390 410 - -
Lac1g2774 867 SUPERFAMILY Protein kinase-like (PK-like) 507 744 IPR011009 -
Lac1g2774 867 CDD RING-Ubox_WDSUB1-like 792 847 - -
Lac1g2774 867 Gene3D Transferase(Phosphotransferase) domain 1 606 772 - -
Lac1g2774 867 SUPERFAMILY RING/U-box 781 864 - -
Lac1g2774 867 Pfam Protein tyrosine and serine/threonine kinase 534 671 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac1g2774 867 Coils Coil 460 494 - -
Lac1g2774 867 PANTHER OS02G0152300 PROTEIN 69 855 IPR051348 -
Lac1g2774 867 Coils Coil 341 375 - -
Lac1g2774 867 MobiDBLite consensus disorder prediction 322 338 - -
Lac1g2774 867 Pfam U-box domain 791 862 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2774 Lac-Chr1:48855125 Lac7g2710 Lac-Chr7:46228463 3.10E-66 dispersed
Lac1g2774 Lac-Chr1:48855125 Lac7g0234 Lac-Chr7:1834159 3.30E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85928 PF07714 PK_Tyr_Ser-Thr 5.00E-18 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2774 - - - 0.0