Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2904 ATGGCGAATATGTGTGCCGATAGCGGCAATCTTATGGCGATTGCTCAGCAAGTTATGAAGCAGAAGCAGCAGCAGGAGCAGCAGCAACAGCAGCACCCACAGCAGCCGCCGCAGCAGCTCACTGGACCCTGTACTTTTGGTTTAAACCCATGGAGTGGCTCGAGCCATGGTCTGTCCGGTGCGCCAGATTTGGGGTTTGGGCTCGCTGGAGCTGGATTTTCCGACCCGTTTCAGGTTCAGAGAGTGGTCGACGGTGGAGAAACGAGCTTTCAGTTTCCGAACTTGGAGCACCATTCTTCTGCTTTCAGATTCTCCGATTTCGACGGCGGCGCTGCTGCGGAGTTCGACTCTGATGAGTGGATGGACAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTTCCTTCTGCTTGCGACGCGTGGCAGTCTAATTCGGATTTTGCTTTCTACGGTGCCGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACTATCCCCTGTTCTTCACCCTCTGATCTTAACAGAGTTATTTTCCCTGAACCTCCGAAAAATCAAACCGCAGTTCAACCGCCGGTAGTTTCATGGACGGGGCTTCCGACGGCGCCTCCACCGGTGGTGGTGAAGGACACTCAACTCCCCAACGTTCCCCTTGCGATCCACAAGAGTGAAGATAACGGCGGTTCGTCGAGTTCTGCAGAGACTGAATCGACGCCGCCACTTCTTAAAACCCTAATTGAATGTGCTCGACTTTCCGAATCGGAGCCAGATCGAGCGGCGCAAATGTTGATTCAGCTTAAGGAATCGTCAACGGAGCACGGAGATCCGACGGAAAGGGTCGCTTTTTACTTTCTCGAAGCTCTATGCCGGAGGTTATCATTTCAATCGGAGAATCGTTTGGTTTCTTCTGAATCCACTTCCGATGACTTCACTCTCTCCTACAAAGCTCTCAACGATGCTTGCCCTTACTCTAAATTCGCCCATTTGACTGCAAATCAAGCTATACTCGAAATTACAGAGAATGCAAGCAAGATTCACATAATCGACTTTGGAATCGCTCAGGGAGTTCAATGGGCGGCTCTTTTGCAAGCTCTCGCAACTCGCTCCACCGGAAAACCAACCGGAATTCGGATCTCCGGCATTCCGGCTCCGATGCTCGGGAACTGTCCAGCGACGGCGCTGTTCGCGACGGGTAATCGACTGGCCGAGTTCGCAAAGCTTCTGGAACTGAACTTCGAATTCGACCCAATTCTGACCCCAATCGAAGAGCTGAACGAATCGTCCTTCCGAATCGACTCCGACGAAACCCTCGCCGTGAATTTCATGCTTCAATTGCACAATCTCCTCGACGAAACTCCTCGCGCCGTTCTGAACATTCTTCAACTCGCTAAATCGCTGAACCCTAGAATCGTAACCCTCGGCGAATACGAAGCCAGCCTGAACCGGGTCGGGTTCTTCAACCGGTTCAAGAACGCCCTCAGATACTACTCAGCCATGTTCGAATCACTGGACCCGAAACTGCCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTGGTACTCGGCCGGCAGATCGCCGGCCTCGTCGCACCGGAGCCGCCACCGGGATCGAAAATCGAACGAATGGAAGACAAAGAACAGTGGAAAATCCTAATGGAAAATTGCAGTTACGAACCAGTAAATCTCAGCCACTACGCGAAAAGTCAAGCTAAAATCCTGTTATGGAAATACGATTACAGCTCTGAGTATTCTTTGATCGAATCCTCACCTGGGTTTCTCTCGTTGGCATGGAATGAAGTCCCGATCATTACAGTTTCTTCATGGCGTTGA 1833 51.66 MANMCADSGNLMAIAQQVMKQKQQQEQQQQQHPQQPPQQLTGPCTFGLNPWSGSSHGLSGAPDLGFGLAGAGFSDPFQVQRVVDGGETSFQFPNLEHHSSAFRFSDFDGGAAAEFDSDEWMDSLMAGGDSTDSSNLPSACDAWQSNSDFAFYGADPFVPCPSRLTIPCSSPSDLNRVIFPEPPKNQTAVQPPVVSWTGLPTAPPPVVVKDTQLPNVPLAIHKSEDNGGSSSSAETESTPPLLKTLIECARLSESEPDRAAQMLIQLKESSTEHGDPTERVAFYFLEALCRRLSFQSENRLVSSESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASKIHIIDFGIAQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIDSDETLAVNFMLQLHNLLDETPRAVLNILQLAKSLNPRIVTLGEYEASLNRVGFFNRFKNALRYYSAMFESLDPKLPRDSNERLQLEKLVLGRQIAGLVAPEPPPGSKIERMEDKEQWKILMENCSYEPVNLSHYAKSQAKILLWKYDYSSEYSLIESSPGFLSLAWNEVPIITVSSWR 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49926542 49928374 + Lag0013396.1 Lac1g2904 596475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2904 610 ProSiteProfiles GRAS family profile. 232 610 IPR005202 -
Lac1g2904 610 MobiDBLite consensus disorder prediction 16 56 - -
Lac1g2904 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 234 609 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lac1g2904 610 Pfam GRAS domain family 242 610 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2904 Lac-Chr1:49926542 Lac5g2043 Lac-Chr5:38892517 5.20E-201 dispersed
Lac3g1400 Lac-Chr3:12513692 Lac1g2904 Lac-Chr1:49926542 9.30E-33 transposed
Lac1g2904 Lac-Chr1:49926542 Lac5g2049 Lac-Chr5:38957428 2.10E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23345 PF03514 GRAS 3.80E-109 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2904 - - - 0.0