Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2984 ATGAAGCTTCTTCTCCTCTTATTCTTTCCGCTGCTGCTGCTGCTCTCCGGTGGTTTCTTTTCCTCCTCCGCCGATACCGGCGCCCAAACCCTTGTGGAGATTCAGGCATTGATGTCCTTTAAGCTCAACCTTCATGATCCTCTTTCCGCATTGACCGGTTGGGATTCTTCCACCCCATTGGCGCCTTGTGACTGGCGGGGTGTTGTCTGTACCAGTAATCGAGTCACCGAGCTTCGTTTGCCTCGTCTTCAACTCGCCGGACGATTGACCGATCAGTTGCCTAACTTGCAGATGCTCCGGAAGTTGAGTATTCGATCCAATTTCTTCAATGGTACGATTCCTTCTTCTTTGTCCAAATGTGCGTTTCTGCGTTCGGTTTTCTTGCAGTACAACTCCTTTTCCGGTGGTCTTCCGGCGGAGTTTGGGAACTTGACTAATCTCCATGTTCTCAACGTGGCGGAGAATCGCCTCTCCGGGGTCATTCCCGGCGACCTTCCGAGGAGCCTGAAGTATCTCGATCTTTCGTCGAACGGATTCTCCGGTCAGATTCCGAGGAGCGTTGTGAATATGACGCAGCTTCAGGTTGTGAATCTCTCTTTCAATAGATTCGGCGGGGAGATTCCGGCGAGTTTCGGTGAGCTTCAACAGCTTCAACATCTCTGGCTCGACCATAATGTTTTAGAAGGGACGTTGCCTTCGGCTCTTGCGAATTGTTCTTCGCTCGTTCATTTGAGCGTTGAGGGAAATGCGCTTCAAGGCGTAATCCCGGCCGCCATTGGAGCTCTTCCGAATCTTCAAGTTATCTCGCTCTCGCAGAATAGCCTCACTGGTTCGGTTCCTTACTCCATGTTTTGCAATGTCTCGACGCATGCGCCGTCGCTTCGGATCGTTCAACTTGGATTTAATGCGTTCACGGACATTGTCAAACCTCAGATAGCGACGTGTTTTAGTGCTCTACAGGTACTCGATATCCAACACAATCAGATAAGGGGAGAGTTCCCCTTGTGGTTAACGGGCGTTACGACTTTGACAGTCTTGGATTTTTCTGTCAATGATTTTTCCGGCGAGATTCCGCCTGGGATTGGGAATCTATCGGGATTGCAAGAGCTTAAAATGGCGAAAAATTCGTTCCACGGGGCGATTCCGTTAGAAATCAAGAACTGCGCCTCGATTTCTGTTATTGATTTGGAAGGGAATCGCTTAACCGGAGAGATTCCGCCGTTTTTGGGCTTTATGAGAGGTTTGAAACGGTTGTCTCTCGGTGGAAATCATTTTTCCGGCATGGTTCCGGTCAGTTTGGGAAATCTGTTGGAGCTTGAAATCTTGAATTTAGCTGACAATGGCTTGAATGGAACCCTTCCTCTTGAGCTAATGAAGCTTGGGAATTTAACGTCAATGGAACTCGGTGGGAACGAGTTTTCTGGTGAGTTTCCAATTGGTATTGGGAACCTCAGTCGCCTTGAGATTTTGAATCTAAGTGCTAACAGTCTCTCTGGGAAGATTCCGTCCAGTCTTGGCAATCTCTTCAAGCTAACAACTCTCGACTTGAGCAAACAGAATGTTTCTGGGGAGTTGCCGTTTGAGCTCTCTGGTTTGCCTAATTTACAGGTAATTGCTCTACAGGAGAACAAGCTATCTGGGAATGTCCCTGAAGGATTCAGTAGTTTGGTGGGTTTGCGCCATTTGAATCTAAGCTCTAATGGATTTTCCGGTCAAATTCCTTCGAATTATGGATTTCTTCGATCGCTTGTTTCATTGTCATTATCAAAGAATCACATTTCTGGGTCGATCCCTTCAGAGCTGGGGAACTGCTCTGATCTAGAAAGTTTGGAGGTCCGTTCAAATGCTCTTTCAGGCCAAATTCCGGCGGATCTTTCTCGTTTATCTCATCTGCAAGAGCTCGATTTGGGTAGGAATAATTTGACTGGCGAAATCCCTGAGGAGATCTCTAGTTGCTCGTCTTTAGAATCTCTCCTTCTGGATTCGAATCATCTTTCCGGTACCATACCGGAGTCGTTATCGGAGCTCTCGAACTTAACTAGGCTTGACCTCTCATCGAACAATTTGACTGGTGTTATTCCTGCTAATCTTAGCTCCATTACTGGATTGATGAGCTTAAACGTTTCAAGTAATGATCTAGAAGGCGAAATCCCACTTCCTTTAGGCTCTAGATTCAACAGCTCATCTGTGTTTGCTAATAATTCTGACTTATGTGGGAAACCACTTGCTCGGAAATGTAAGGATACAGAGAAAAAAGACAGAATGAAGAGATTGATACTATTCATTGCAGTGGCCGCCAGTGGAGCTTGCCTCTTGACTTTGTGTTGCTGCTTCTACATTTTCAGCCTGTTGAGATGGCGGAAGAGGCTCAAAGAGAGAGCGTCTGGAGAGAAGAAAACAAGTCCAGCAAGGGTTAGCTCTGCGGCTAGTGGTGGCCGTGGAAGCACAGAAAATGGAGGGCCAAAGCTCGTGATGTTCAACAATAAGATTACTCTAGCGGAAACAATCGAGGCAACAAGGCAATTCGATGAAGAAAATGTTCTAAGCAGAACCCGTTATGGGTTGGTTTTCAAGGCTTGTTACAATGATGGCATGGTGCTCTCAATCCGCCGTCTCTCAAATGGTTCATTGGACGAAAACATGTTCAGAAAAGAAGCTGAAGCATTGGGAAAAGTCAGGCACCGCAATCTGACTGTTCTTCGTGGCTACTACGCTGGCCCTCCTGATATGCGGCTATTGGTATACGATTACATGCCTAATGGAAACCTTGCCACTCTCCTTCAGGAAGCATCTCACCAAGATGGTCATGTTCTGAATTGGCCAATGCGGCATCTCATTGCTCTAGGAATCGCCCGTGGCCTAGCCTTTCTCCATTCATCTTCTATAATCCATGGAGATGTCAAGCCACAAAGCGTTCTATTCGATGCCGATTTTGAAGCTCATTTGTCCGACTTCGGGCTAGACCGACTAACCGTAGCCTCTGCCGAAGCATCCACATCTACCTTGGTGGGCACTTTGGGCTACATTGCCCCGGAAGCAGTGTTGACGGGGGAGGCCACAAAGGAATCTGATGTCTACAGCTTTGGGATTGTGTTGCTAGAGATTCTAACAGGGAAGAAACCAGTGATGTTCACAGAAGATGAAGACATTGTCAAGTGGGTGAAAAAGCAATTGCAGAGAGGCCAAATTACAGAGCTCCTAGAGCCAGGCTTGCTTGAGCTGGATCCTGAATCATCAGAATGGGAAGAGTTCTTGCTGGGTGTCAAAGTTGGATTGCTCTGCACTGCACCCGATCCCCGCGATCGGCCGACCATGTCCGATATCGTTTTCATGCTCGAAGGATGCCGAGTCGGACCGGACATCCCCTCCTCCGCCGATCCCACCTCCCAACCGTCACCGGCGTAA 3405 47.81 MKLLLLLFFPLLLLLSGGFFSSSADTGAQTLVEIQALMSFKLNLHDPLSALTGWDSSTPLAPCDWRGVVCTSNRVTELRLPRLQLAGRLTDQLPNLQMLRKLSIRSNFFNGTIPSSLSKCAFLRSVFLQYNSFSGGLPAEFGNLTNLHVLNVAENRLSGVIPGDLPRSLKYLDLSSNGFSGQIPRSVVNMTQLQVVNLSFNRFGGEIPASFGELQQLQHLWLDHNVLEGTLPSALANCSSLVHLSVEGNALQGVIPAAIGALPNLQVISLSQNSLTGSVPYSMFCNVSTHAPSLRIVQLGFNAFTDIVKPQIATCFSALQVLDIQHNQIRGEFPLWLTGVTTLTVLDFSVNDFSGEIPPGIGNLSGLQELKMAKNSFHGAIPLEIKNCASISVIDLEGNRLTGEIPPFLGFMRGLKRLSLGGNHFSGMVPVSLGNLLELEILNLADNGLNGTLPLELMKLGNLTSMELGGNEFSGEFPIGIGNLSRLEILNLSANSLSGKIPSSLGNLFKLTTLDLSKQNVSGELPFELSGLPNLQVIALQENKLSGNVPEGFSSLVGLRHLNLSSNGFSGQIPSNYGFLRSLVSLSLSKNHISGSIPSELGNCSDLESLEVRSNALSGQIPADLSRLSHLQELDLGRNNLTGEIPEEISSCSSLESLLLDSNHLSGTIPESLSELSNLTRLDLSSNNLTGVIPANLSSITGLMSLNVSSNDLEGEIPLPLGSRFNSSSVFANNSDLCGKPLARKCKDTEKKDRMKRLILFIAVAASGACLLTLCCCFYIFSLLRWRKRLKERASGEKKTSPARVSSAASGGRGSTENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEAEALGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTVASAEASTSTLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50566475 50569879 + Lag0013476.1 Lac1g2984 596555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2984 1134 ProSiteProfiles Protein kinase domain profile. 842 1121 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g2984 1134 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 470 750 - -
Lac1g2984 1134 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine rich repeat 654 713 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine rich repeat 530 568 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lac1g2984 1134 FunFam Piriformospora indica-insensitive protein 2 358 455 - -
Lac1g2984 1134 Gene3D Transferase(Phosphotransferase) domain 1 918 1120 - -
Lac1g2984 1134 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 439 552 IPR046959 -
Lac1g2984 1134 Pfam Leucine Rich Repeat 343 364 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 391 411 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 582 604 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 486 508 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 319 338 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 415 436 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 99 120 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 123 144 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 Pfam Leucine Rich Repeat 630 652 IPR001611 GO:0005515(InterPro)
Lac1g2984 1134 MobiDBLite consensus disorder prediction 800 814 - -
Lac1g2984 1134 Gene3D Ribonuclease Inhibitor 457 755 IPR032675 -
Lac1g2984 1134 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 918 1120 - -
Lac1g2984 1134 Pfam Protein kinase domain 852 1109 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g2984 1134 SMART LRR_typ_2 556 578 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 190 213 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 580 604 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 262 286 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 144 168 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 412 435 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 628 652 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 484 508 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 214 237 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 532 555 IPR003591 -
Lac1g2984 1134 SMART LRR_typ_2 676 700 IPR003591 -
Lac1g2984 1134 Gene3D Phosphorylase Kinase; domain 1 815 917 - -
Lac1g2984 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 208 308 - -
Lac1g2984 1134 Gene3D Ribonuclease Inhibitor 167 253 IPR032675 -
Lac1g2984 1134 Gene3D Ribonuclease Inhibitor 356 456 IPR032675 -
Lac1g2984 1134 SUPERFAMILY L domain-like 579 734 - -
Lac1g2984 1134 MobiDBLite consensus disorder prediction 795 822 - -
Lac1g2984 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 189 - -
Lac1g2984 1134 SUPERFAMILY L domain-like 32 307 - -
Lac1g2984 1134 SUPERFAMILY Protein kinase-like (PK-like) 823 1122 IPR011009 -
Lac1g2984 1134 SUPERFAMILY RNI-like 314 618 - -
Lac1g2984 1134 Gene3D Ribonuclease Inhibitor 254 355 IPR032675 -
Lac1g2984 1134 FunFam Putative LRR receptor-like serine/threonine-protein kinase 806 917 - -
Lac1g2984 1134 Gene3D Ribonuclease Inhibitor 32 166 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2984 Lac-Chr1:50566475 Lac2g1122 Lac-Chr2:8921133 5.10E-53 dispersed
Lac1g2984 Lac-Chr1:50566475 Lac5g2063 Lac-Chr5:39108611 1.20E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85932 PF00069 Pkinase 1.30E-35 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2984 - - - 0.0