Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3225 ATGGAGTTACTCGATGCCCTTGTTCTCCTCTTCGCCTTCCTCTTTTTCTCCTTATGGTGGCGTTACTGGTCCTCCACCGGCGGCGGATCCAAGAATCTCCCGCCGGGGCCACCGGGCTGGCCGATCGTCGGCAACCTAATACAAGTCATCCTCCAACGTCGTCCTTTCATCTTCATAGCTCGCGATTTACGTGAAAAGTACGGCCCGATTTTCACCATGCAAATGGGCCAACGCACGCTCATCATAGTGTCGAGTGCCGAGCTGATTCACGAAGCTCTCGTGCAAAGAGGACCGTTATTCGCCAGCCGCCCCGCCGACTCCCCGATCCGCCTCGTCTTTAGCGTCGGAAAATGCGCCGTCAACTCCGCCGAGTACGGCCCTCTCTGGCGAACCCTCCGCCGCAACTTCGTGACGGAGCTGATAAACCCGACGAGGATAAAGCAGTGCAGCTGGATTCGCAAGTGGGCCATAGAGAGCCATCTCGAAAGGCTGAGGAAAGAGAATTCGGAGAAGGGATTTGTGGAGGTGATGAGCAACTGCCGGCTGTCGGTGTGTAGCATTCTGATTTGCATTTGCTTTGGAGCGAGAATCCCGGAAGAGGACATCAAGGTGATAGAGAGCATATTAAAGGACGTGATGTTGATTACGTTGCCGAAGCTTCCGGACTTTTTGCCGATTCTGACACCGTTGTTTAGGCGCCAGCTGAAGGAGGCGAAGGAGCTGAGGAAGAAACAGTTGGAGTGTCTGATTCCGTTGATAAGGAAGAGGAGGATGTTTGTGGAGAGGAATGGGGACGAGAGCGTCAGGGAGGAGTTGCCGGAGATGGCTAGTCCGATTGGGGCGGCGTATCTTGACTCGCTCTTTGAATTGGAAACGCCGGGACGAGGGCGGCTGGGGGAGGAGGAGCTTGTGACGCTTTGTTCGGAGGTTATTAATGCAGGAACTGATACGAGCGCCACTGCGTTGGAGTGGGCGTTGCTTCATTTGGTACAAGAGCAAGACATTCAGGAAAGACTATACAAGGAAATTGTTGACGTTGTGGGTAAGGATGGGGTGATAACCGAAGGCGACATAGAGAAAATGCCATATCTAGGGGCAGTGGTAAAAGAGACTTTCCGGCGACATCCACCGAGCCATTTCTTACTATCTCACGCGGCTACAAAAGAGACGGAGCTCGGCGGCTACACAATTCCGGCGGACGCCAGCGTGGAGTTTTACACTGCCCATCTGTCCGACGACCCGAACACGTGGGAAGAACCGGGTTCGTTCCGACCGGACAGGTTCTTGGAGGGCGACGGCGTTGGCGTGGACGTGACCGGAACTAAGGCCGTCAAGATGGTGCCTTTCGGGGCAGGGCGGCGGATCTGCCCGGCCATGACGTTGGGCACGTTGCATGTGCACATGATGCTGGCAACAATGGTACATGCATTCAAGTGGGTCCCGGTTCCCGGATCCCCGCCCGACCCGACCGAGACCTTTGCTTTCACGGTTATTATGAAGAATCCTCTCAAGGCTGTGGTATTGGACAGGTCTCGTTTGTAA 1542 55.06 MELLDALVLLFAFLFFSLWWRYWSSTGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFIARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPTRIKQCSWIRKWAIESHLERLRKENSEKGFVEVMSNCRLSVCSILICICFGARIPEEDIKVIESILKDVMLITLPKLPDFLPILTPLFRRQLKEAKELRKKQLECLIPLIRKRRMFVERNGDESVREELPEMASPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQEQDIQERLYKEIVDVVGKDGVITEGDIEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKAVKMVPFGAGRRICPAMTLGTLHVHMMLATMVHAFKWVPVPGSPPDPTETFAFTVIMKNPLKAVVLDRSRL 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 52219002 52221097 - Lag0013717.1 Lac1g3225 596796
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3225 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac1g3225 513 CDD CYP77_89 66 504 - -
Lac1g3225 513 Pfam Cytochrome P450 34 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 FunFam Cytochrome P450 family protein 28 512 - -
Lac1g3225 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g3225 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 507 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0636 Lac-Chr13:4715228 Lac1g3225 Lac-Chr1:52219002 9.50E-111 dispersed
Lac1g3225 Lac-Chr1:52219002 Lac9g1471 Lac-Chr9:33084072 9.00E-98 dispersed
Lac1g3225 Lac-Chr1:52219002 Lac8g2321 Lac-Chr8:41359684 1.20E-126 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3225 K21995 - csv:101216852 983.015