Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3344 ATGTCTCGTAATCTCAAACTCCATAAACTCGTATTCCTTCTCCTTCTCTTCTCCTTCTTCACCCCATCATTTTCAGATTCAATTCCAACTCCCATTTCCCCATGCGAATCTCAGCTCCAACAAGGTTGCCATGACAGAGTGAAGTCCCTGAAACTCAAGCTCATCGCCATCGCATCCATTTTAGTCGCGAGCATGCTCGGCGTTTGTCTTCCCCTGTTCTCCCGCACGGTGCCGCTGCTTCAACCAGCGGGAAATCCCTTCGCAATCGTCAAGGCATTTGCCTCCGGCGTGATTCTAGCCACCGGATATATGCACGTTTTGCCCGATTCCTTTGATTGCTTGACCTCCCCCTGTCTGCCGGAGAATCCATGGCGTAAATTCCCTTTCACCACATTCATAGCAATGCTTTCGGCTGTTATGACTCTAATGTTGGACTCGTTTTCGATGAGTCGCTACAAAAAGCAATTGATCGTGGATCAAGCTGCAGAAGAAGGGAATAACGAGGACAAGGAAATGGGTGACAATTTGGGAAAAGAAGAAGGAAACGATCATAAAATTGGAGCGCAATTGCTACGACACCGTGTGGTTGCGCAATTGTTAGAAGCGGGGATCGTGGTGCATTCGGTAGTGATAGGGCTTTCGATGGGGGCTTCGGATAATCCTTGCACCATAAGGCCGCTCATTGCGGCGCTCTGCTTTCATCAGCTCTTTGAAGGGATGGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAAGTTGAAGATGAAGGCGATAATGGTATTCTTTTTCTCGATCACGACTCCATTTGGAATATCATTGGGGATTGGATTGGCGAATGTGTACAGTGAGAATAGTCCCACAGCTCTTATAGTTGTGGGGATATTGAATGCGGTGTCTGCTGGGTTGCTGAATTACATGGCGTTGGTTGATTTGTTGGCGTATGATTTCATGGGGGCTAAGTTGCAAGCCAATCTCAAGCTTCATATATGGGCTTATGTTGCGGTTTTGTTGGGCGCTGGAGGCATGTCTTTGATGGCAAAATGGGCTTAG 1050 47.9 MSRNLKLHKLVFLLLLFSFFTPSFSDSIPTPISPCESQLQQGCHDRVKSLKLKLIAIASILVASMLGVCLPLFSRTVPLLQPAGNPFAIVKAFASGVILATGYMHVLPDSFDCLTSPCLPENPWRKFPFTTFIAMLSAVMTLMLDSFSMSRYKKQLIVDQAAEEGNNEDKEMGDNLGKEEGNDHKIGAQLLRHRVVAQLLEAGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQAEYKLKMKAIMVFFFSITTPFGISLGIGLANVYSENSPTALIVVGILNAVSAGLLNYMALVDLLAYDFMGAKLQANLKLHIWAYVAVLLGAGGMSLMAKWA 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53117715 53118764 - Lag0013836.1 Lac1g3344 596915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3344 349 PANTHER ZINC/IRON TRANSPORTER 49 348 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lac1g3344 349 Pfam ZIP Zinc transporter 50 346 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Lac1g3344 349 NCBIfam ZIP zinc/iron transport family 35 349 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1308 Lac-Chr10:11712642 Lac1g3344 Lac-Chr1:53117715 5.80E-104 dispersed
Lac12g0233 Lac-Chr12:2587947 Lac1g3344 Lac-Chr1:53117715 3.10E-74 dispersed
Lac1g3344 Lac-Chr1:53117715 Lac5g0012 Lac-Chr5:154207 7.20E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3344 K14709 - csv:101204028 521.546