Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3371 ATGGGAAAGCATTCGAAGACCAGCTGCAAATCGGCTTCCCACAAGCTCTTTAAGGATAAGGCGAAGAACCGTGTCGATGATCTGCAAAGTATATTTGTAGATTTGCAATATGCAAGGAAAGAGAGCCGCTCAGTTGATGTGGCAGTTCTCGAGGAACAAGTTCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCATTTTCATCCGACATTTGTCGATTGTTACAACTTTGCGAGGAGGATGATGATGCATCTAGTCCATTAGCTGCTCCGAAGCCTGAACCTAATGAACAAAATCTGCAGGTTGGAGATACTATGGCACTTCAAGAGGGATATAATATGAATCGTGTACACCAAGAACCAAGCTTCCCTCTAGTTGATCAATGCAAGAACTCCCCTTCTGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGGCCTACACATTTGGAATGTCATCAGTTTGATTTACATCAAGGCATCGAGCACAGCTTTTACTCTCTCCTTAATGGTAGAGGTTTGTGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATATGCCCTCCACCTGCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGATTGCCCACGACCTGCCCAAGGGTTGGATTGGTGTGAGGACTACTGTAGCAGTTTTCATGCTGCCTTGGCATTGAACGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAACTTTTTGATTTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCTGATTATAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGCTGAAACTTGTTGATGGGAAAAAAAGTTCTAAGGCGAAAGTAACAAATGATTCAGTTGCTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAGTTTCCTGATAATAAACGCTTTGTGAAGGGGAGGACCAAAATTAACTCAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTTCATGCACAATACGATTACCTTGTGGAGAATTTGAGCGAATATTACCTTACATAG 1452 44.28 MGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRSVDVAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMALQEGYNMNRVHQEPSFPLVDQCKNSPSGVHGMAMNNLEGPTHLECHQFDLHQGIEHSFYSLLNGRGLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKSSKAKVTNDSVADLQRQMGRLTAEFPDNKRFVKGRTKINSKVGIGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53317558 53320228 + Lag0013863.1 Lac1g3371 596942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3371 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 481 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3371 Lac-Chr1:53317558 Lac9g2010 Lac-Chr9:39717427 6.00E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23385 None None None None Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3371 - - - 0.0