Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3383 ATGGGCCATGGCCAATCCACATTGCAACAACCACTTTTATTCCCTCGGGGTTTGCCTTCATCTTTACTACTACGACTTCACAGAGCTGGACCAGTTGTCTACTGCCTTCTCTTTCAAAATTGCAGTGCCTATGCCTATGCAATTCAATTTTTGAACGGTTTCTTCATTGGTTTCTTCTCCAGCTTTTCCTCTGATGTTCATTTGGGTATAAGCACTTCATTTGTGGAAATGGGTTCTGGAGACTGGTTTAAGACAGTAATTCGCTTAAAGAAAGTAAAAACCAGCAGTTCAAAACATGCTAAGGAGAAATCAAATGCTTTGAAATCAAATAATTTGCAAAAAGATTCCTCGAAGTTAAAAAATGGTGGTACTAATGGAAGCAGAAAATCTCTTGGGATGCCAATTGAAGATGTAGCTGCAGTTCGGATTCAGACAGCATATCGAGCATATCGTGCCAGGAGAAATTTACGTCGCTTGAAAGGAACTGTGAGACTGCAGAATCTGACTCAAGGAAATTCTGTTCGAAGGCATGCTACATCTACCTTAGGCTATCTTCATTCATGGAGCAATATACAGACTCAAATTAGGACTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAGAGATTAGAGAATCAACGAAAACTTGAGGCTAAGCTTCATGATATAGAGGTGGAGTGGTCTGGCGGTGCAGACACCATGGAGGAGATTCTTTCAAGGATACACGAGAGAGAAGAAGCAGCTGTTAAGCGTGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAGTGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCAGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCATGGGAAAGCCGTGTACCATCTCAGTTAGTTAGTCCAAAGAAATCGACAATTAGGCAATCAAGCAAAGTCAGTAAGAAAAACTCACCATCTCCGAAAGCACGAGTTTTGGTTAAACCTCCTTCCCCAAATGGCAAATCAACTCCCAAGGCTCGGAGGTTATCCTATCCAGCAACCGAGAAAACCGAGAAACTGGCCACAGAAGAAAAAACCGTCAAGAAAAGCGTTAAAGATGATGAAGGAAACACTAAGAAAGAAGAAACAGTGTCTTAA 1167 42.42 MGHGQSTLQQPLLFPRGLPSSLLLRLHRAGPVVYCLLFQNCSAYAYAIQFLNGFFIGFFSSFSSDVHLGISTSFVEMGSGDWFKTVIRLKKVKTSSSKHAKEKSNALKSNNLQKDSSKLKNGGTNGSRKSLGMPIEDVAAVRIQTAYRAYRARRNLRRLKGTVRLQNLTQGNSVRRHATSTLGYLHSWSNIQTQIRTRRLCMVTEGRLRQKRLENQRKLEAKLHDIEVEWSGGADTMEEILSRIHEREEAAVKRERAMAYAFSHQWRANSSEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQLVSPKKSTIRQSSKVSKKNSPSPKARVLVKPPSPNGKSTPKARRLSYPATEKTEKLATEEKTVKKSVKDDEGNTKKEETVS 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53405612 53410482 + Lag0013875.1 Lac1g3383 596954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3383 388 MobiDBLite consensus disorder prediction 305 388 - -
Lac1g3383 388 PANTHER IQ-DOMAIN 5-RELATED 82 340 - -
Lac1g3383 388 MobiDBLite consensus disorder prediction 307 327 - -
Lac1g3383 388 MobiDBLite consensus disorder prediction 354 388 - -
Lac1g3383 388 Gene3D - 98 182 - -
Lac1g3383 388 MobiDBLite consensus disorder prediction 106 128 - -
Lac1g3383 388 ProSiteProfiles IQ motif profile. 136 164 - -
Lac1g3383 388 MobiDBLite consensus disorder prediction 97 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3383 Lac-Chr1:53405612 Lac5g2434 Lac-Chr5:42959095 4.50E-57 dispersed
Lac1g3383 Lac-Chr1:53405612 Lac8g2437 Lac-Chr8:42431493 1.20E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3383 - - - 0.0