Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3457 ATGAAGAAATCGACTTTCTTTTGCCTTCTTCTGCTGCTGCTCCTCCCTCTAATTCAACAGGCCTCTTCTTCTTCTTCCCAGGCTTACATTGTGTACTTTGGAGAGCACCATGGAGGCAAAGCATGGGAGGAGATTGAAGAAACCCACCATTCATATTTGGTGTCTGTAAAAGAAACTGAAGAAGATGCAAAATCCTCTCTTCTTTACAGCTACAAGCGCACCATCAATGGCTTTGCAGCTCTGCTTACTGAACAAGAAGCCTCCAAACTTTCAGAATTGAAGGAAGTGGTGAGTGTGATTCAGAGTAAGAAATACAGCATGCACACCACAAGGTCATGGGAGTTTTCTGGGGTTGAAGAAGACAAGCCCAGAATTAATGACTTGGTTTCTAGAGCCAACTATGGAAAAGATGTTGTCATTGGAATGCTTGACAGTGGTGTGTGGCCAAAATCCAAGAGCTTTAGTGATGAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCAGGCTTTGAATCAGCTCATTGTAATAGGAAGATAATTGGAGCTAGATATTACCTAAAGGGATATGAACATCACTTCGGGCGTTTAAATGAAACGATTGACTACCGATCACCGTGCGACAAGGACGGCCACGGATCACACACCGCTTCCATTGCCGGCGGCCGGCTGGTCTACAACGTCTCAGCCTTAGGCGGCGTCGCTCTGGGCACGGCCTCCGGCGGGGCCCCGGGGGTCCGGCTGGCAATTTACAAAGTTTGTTGGGCAATTCCCAACCAAATGAAAGTTCTGGGAAACGTTTGCTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGACGTTCTGAGCCTCTCCATCGGAAAATCGGATCCGTACAATTACACCGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAGGGACATTGTGGTGTCTTGTAGCGCCGGAAATTACGGCCCTACGCCGTCGGCGTTGTCGAATATTGCACCGTGGATCATCACCGTCGGAGCTAGCACCGTGGATCGGGAATTTTACTCTCCTGTCATTCTCGGAAATGGGTTGAAGATTAAGGGATTGTCGGTGGCTCCGTCGAAGTTGGAGATGAAGAAGATGTACCCTTTAGTGTATGCTAGAGATATAGAAATGCCACATGTACTCCAAAACGAATCCGGTCTATGTGTTGCAGGCTCGCTTTCACATGAGAAAGCCAGAGGAAAAATAGTGCTGTGTTTTAGAGGAGAAGGAATCAGCAGATACGCCGGCAGCCTGGAAGTGAAAAGGTCCGGCGGCGCCGGAATGATAATCGGAAACGTGCCGGCGGTGGGACGGAGGCTGCACGCCGATCCCCATTTTGTTCCGGCCACCGCCGTGTCTTACGAAGATGCAAATATGATCCTCAAATATATAAAATCTCAGGCAAATCCAACTGCAACAATTGTTCCACCCATCACCATCTATGGCTCTAGGCCGGCGCCGGCCATGGCCAACTTTTCAAGTAGAGGTCCAAACCTCATCGATCCTCATTTTCTTAAGCCGGACATAACAGCACCAGGAGTGGACATTCTAGCAGCATGGTCAGAGGAAGATTCCCCAACAAAACTACCAAAATTCTTGGACCCTCGTATCGTCAAATACAATCTCTACTCCGGCACATCCATGTCCTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGCGCCATCCACCCCACCTGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACTACCGCCACCACCACCAACAAATCCGGCCACCCCATCACCGACGACTCCACCGCCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGCCCCTCCAAGGCGGCCGACCCCGGCCTTGTCTACGACTCCAATTACACCGACTATCTCCACTACCTGTGCGGCCTAAAAATGAACTCCATCGACCCTTCCTTCACGTGCCCCCCACGTGCCCTCCTAGCCCACGACCTCAATTACCCTTCCATCGCCGTCCCCAAGCTGAGAGGCGCCGTGAGGATGAAAAGGACGGTGACCAACGTGGGCGGCGGAGGTAAAAGTGTTTACTTTTTTCAGAGCCAGACGCCGGCGGGTGTGGCGGTGAGGGCGGATCCCAATGTTTTGTACTTCGACAGAGTTGGGCAGAGTAAAAGTTTTAGGATCACGGTGAGTGGGAAGGTGAAGGGTGGGGTTGATGGAAGTGGATACTCTTTTGGTTGGTTTGCTTGGAGCGATGGGATTCACTATGTTAGAAGCCCAATTGCAATTTCTTCAACTTAA 2334 51.93 MKKSTFFCLLLLLLLPLIQQASSSSSQAYIVYFGEHHGGKAWEEIEETHHSYLVSVKETEEDAKSSLLYSYKRTINGFAALLTEQEASKLSELKEVVSVIQSKKYSMHTTRSWEFSGVEEDKPRINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDEGMGPIPKSWKGICQTGPGFESAHCNRKIIGARYYLKGYEHHFGRLNETIDYRSPCDKDGHGSHTASIAGGRLVYNVSALGGVALGTASGGAPGVRLAIYKVCWAIPNQMKVLGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNYGPTPSALSNIAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLEMKKMYPLVYARDIEMPHVLQNESGLCVAGSLSHEKARGKIVLCFRGEGISRYAGSLEVKRSGGAGMIIGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSQANPTATIVPPITIYGSRPAPAMANFSSRGPNLIDPHFLKPDITAPGVDILAAWSEEDSPTKLPKFLDPRIVKYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTTNKSGHPITDDSTADNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFTCPPRALLAHDLNYPSIAVPKLRGAVRMKRTVTNVGGGGKSVYFFQSQTPAGVAVRADPNVLYFDRVGQSKSFRITVSGKVKGGVDGSGYSFGWFAWSDGIHYVRSPIAISST 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53945135 53953326 + Lag0013949.1 Lac1g3457 597028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3457 777 Gene3D - 354 499 - -
Lac1g3457 777 CDD Peptidases_S8_3 105 599 IPR034197 -
Lac1g3457 777 CDD PA_subtilisin_like 361 492 - -
Lac1g3457 777 Pfam PA domain 385 477 IPR003137 -
Lac1g3457 777 Gene3D - 652 777 - -
Lac1g3457 777 Pfam Subtilase family 135 627 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac1g3457 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Lac1g3457 777 FunFam subtilisin-like protease SBT1.5 354 499 - -
Lac1g3457 777 SUPERFAMILY Subtilisin-like 108 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac1g3457 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Lac1g3457 777 FunFam Subtilisin-like protease SBT1.5 137 365 - -
Lac1g3457 777 Pfam Fibronectin type-III domain 675 774 IPR041469 -
Lac1g3457 777 MobiDBLite consensus disorder prediction 600 619 - -
Lac1g3457 777 FunFam Subtilisin-like protease SBT5.3 18 108 - -
Lac1g3457 777 Gene3D Peptidase S8/S53 domain 137 648 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac1g3457 777 ProSiteProfiles Serine proteases, subtilase domain profile. 112 635 - -
Lac1g3457 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 772 IPR045051 -
Lac1g3457 777 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Lac1g3457 777 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Lac1g3457 777 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Lac1g3457 777 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3457 Lac-Chr1:53945135 Lac5g0642 Lac-Chr5:7928245 2.10E-170 dispersed
Lac1g3457 Lac-Chr1:53945135 Lac5g0734 Lac-Chr5:9543800 4.20E-163 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3457 - - - 0.0