Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3619 ATGGTCGGGGGCTTTGAAGTCGGAGCTGTCCCCTACAACCCAGACGGTTGGGGTCCGCCGGACTCCACCGCCACTCTCGCCGCTTCCTCCAATCTCCCTCTCAATGTCCCCTTTGCTCCATTCTCTCGCTCCGATAAGCTTGGTCGGATCGCCGATTGGACACGAACGATGAATAACCCTGGTCGCCCCAAGACTGCTTCGGATTCCGTCTTCGATTTCACCAATGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGGAAGCCTCCCCCTCGCCCCAAATTTGGCCCTAAATGGCGATTCAACCAGCAGAGGACGCAGCTGCCTCAGCGCCGTGACGAAGAAGTTGAGGCTCGAAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGCCTCTACAACCTCAACAGGTCTAATGTCAATGCGCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCGGAATGGAACATGCTCGATCAGATTCCCTTCTCCACTTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTACGATCGAGCATACGACCGTATCACTCCCAAGAACGAGCGCCGTCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACCGATGACCCTGTCATTCGTCGTCTCGCAAATGAGGATAAAGCCACAGTTTTTGCTACTGATGCCATCCTTTCTACGCTCATGTGTGCTACGAGATCGGTTTATTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGATCGCAACTTGATTTGCTTGCCGTCCACGAGACCTCTCAGGAACCCCTACCAGAGGCCAAGGATGATATTAATTCAGCTTACTCACTGAGCGTTGAAGCCGCTTACATTAATCAGAACTTCTCGCAACAAGTTTTAGTTAGGGACGGAAATAAGGTGGCTTTTGACGAGCCAAACCCATTTGCAAATGAGGGCGAGGAGGTCGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTCGATGATGACATGTATCTTGTAGCGAGGTGTGAGGTTCAAAGTGTCATGGAGGTTAATAAGCAGAGATCATTCTTGACTTTGAATGCTCTTAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCTACTGAGTTGAAGAACAATGCTAACAAATTGGCAAAATGGACAGCTCAGGCCCTGTTGGCTAGCGCAGATATGATGAAGTTGGGTTATGTCTCTAGGGTTCATCCTCGTGATCACTTTAACCATGTCATCCTAGCTGTGGTTGGATATAAACCTAAGGATTTTGCAACTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTCAAATCAATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGACCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGCCACTGCTAATGCGGGGACAGATGATGCCGAAGAGAAAGCAGATGCTGCTCAAGCTTAA 1701 49.27 MVGGFEVGAVPYNPDGWGPPDSTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATANAGTDDAEEKADAAQA 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55296365 55298065 + Lag0014111.1 Lac1g3619 597190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3619 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Lac1g3619 566 MobiDBLite consensus disorder prediction 114 134 - -
Lac1g3619 566 MobiDBLite consensus disorder prediction 526 541 - -
Lac1g3619 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 5 517 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Lac1g3619 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 540 IPR007783 GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)
Lac1g3619 566 MobiDBLite consensus disorder prediction 526 566 - -
Lac1g3619 566 Coils Coil 118 138 - -
Lac1g3619 566 MobiDBLite consensus disorder prediction 88 134 - -
Lac1g3619 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3619 K03251 - csv:101208923 1074.31