Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g3629 ATGGAGATTATTCACTGTGCACGTCTACTGTGTGTTGTTTTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTGGATGAATTTGGAGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTATTATGGTCAGCTTAGACAGAATACTACTTCAACTTCTAGTGGATTAAGCATCCACAAACCGAGAAAAATATCAAGAAAACATCGAAGATATAGGTCTTACATAGCTCGAGTTCATGATTCATTGTTGAACAAGGTCTTGAAGGGGGAGAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGAGAGAGGTCGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGCCTACCACAGGGAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGGACTGGGATTGTGATAGGGTTCATTGACACTGGCATTGACCCTGCACACCCCAGCTTTGCTGATGATTTGACTGATAATCCTTTTCCCATTCCGGCCCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTAGGAGCGCGCCATTTTGCAGCCTCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACTGCTTCAATAGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTTCCGGACATCACTTTGGAAACGCGAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGGGTGGATATTATAAGTCTATCAATCACACCGAATAGGCGTCCCCCTGGTATTGCAACGTTTTTTAATCCCATAGACATGGCACTGCTCTCTGCAGTAAAGGCAGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCATCCTTCAGTCCCTGGATCTGTACTGTTGGTGCTGCTTCTCATGATAGAAGCTATGCTAACTCTATAACCCTTGGCAATAATGTCACCATCCTTGGGGTTGGACTTGCACCTGGAACTTATAATGACACAAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGACACAAATGTTTCGGAGGACATGTACGTGGGTGAATGCCAAGACTCCAGTAACTTTGATCGGGACCTGATTGAAGGGAACCTTTTAATATGCAGCTACTCGATCAGATTTGTGCTCGGGCTTTCCACGGTTAAACAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTCGGCTTAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGCATATCTGGAGGATTAAAGGCAAATTATAGCTCCACTGCCCCACAAATTATGTATTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGCAATTTCATATGGGCTGCCTGGAGCTCTGTTGCCACTGACTCTGTCGAATTTCTCGGTGAAAACTTCGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACTGCTTCTCTTTACGATAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTACGCTAACCCCGAACAGAACCAGTCTCCAGCTACACCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACTGCAGCTCTCAACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGCGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCTAGCATCAGTGGAGCTGATCTGAACTTGCCCTCTGTCACGATAGCGAAACTTAACCAGTCGAGAGTAGTACAACGGACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCGACTCGATTTACAATCGGCAGTGGCGAGAAACAACAGTTGACGATATTCTTCAATGCAACGATGAACAGCTCGACTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAATGCAGGCCATATTATCAACATTCCTCTTTCAGTGATTTTGAAGATCTCATATAACAATACCACTAATTGA 2523 44.0 MEIIHCARLLCVVFCFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSTSSGLSIHKPRKISRKHRRYRSYIARVHDSLLNKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRREVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGTGIVIGFIDTGIDPAHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVSGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWICTVGAASHDRSYANSITLGNNVTILGVGLAPGTYNDTKYKLIAAIHALNNDTNVSEDMYVGECQDSSNFDRDLIEGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASISGGLKANYSSTAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQQLTIFFNATMNSSTASFGRIGLFGNAGHIINIPLSVILKISYNNTTN 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55385447 55391269 + Lag0014121.1 Lac1g3629 597200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g3629 840 CDD Peptidases_S8_3 142 649 IPR034197 -
Lac1g3629 840 CDD PA_subtilisin_like 388 523 - -
Lac1g3629 840 ProSitePatterns Serine proteases, subtilase family, serine active site. 613 623 IPR023828 -
Lac1g3629 840 Gene3D Peptidase S8/S53 domain 169 703 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac1g3629 840 ProSiteProfiles Serine proteases, subtilase domain profile. 147 690 - -
Lac1g3629 840 Pfam Fibronectin type-III domain 736 829 IPR041469 -
Lac1g3629 840 PRINTS Subtilisin serine protease family (S8) signature 612 628 IPR015500 -
Lac1g3629 840 PRINTS Subtilisin serine protease family (S8) signature 167 186 IPR015500 -
Lac1g3629 840 PRINTS Subtilisin serine protease family (S8) signature 247 260 IPR015500 -
Lac1g3629 840 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 172 183 IPR023827 -
Lac1g3629 840 FunFam Subtilisin-like protease SBT1.5 169 392 - -
Lac1g3629 840 SUPERFAMILY Subtilisin-like 142 694 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac1g3629 840 Gene3D - 707 831 - -
Lac1g3629 840 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 140 IPR037045 -
Lac1g3629 840 Pfam Peptidase inhibitor I9 34 141 IPR010259 -
Lac1g3629 840 Pfam Subtilase family 167 662 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac1g3629 840 Gene3D - 382 550 - -
Lac1g3629 840 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 90 794 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1390 Lac-Chr10:12967072 Lac1g3629 Lac-Chr1:55385447 6.20E-30 dispersed
Lac1g3629 Lac-Chr1:55385447 Lac9g1818 Lac-Chr9:37984925 3.00E-90 dispersed
Lac1g3629 Lac-Chr1:55385447 Lac6g2273 Lac-Chr6:39899532 6.70E-191 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g3629 - - - 0.0