Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g3629 | ATGGAGATTATTCACTGTGCACGTCTACTGTGTGTTGTTTTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTGGATGAATTTGGAGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTATTATGGTCAGCTTAGACAGAATACTACTTCAACTTCTAGTGGATTAAGCATCCACAAACCGAGAAAAATATCAAGAAAACATCGAAGATATAGGTCTTACATAGCTCGAGTTCATGATTCATTGTTGAACAAGGTCTTGAAGGGGGAGAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGAGAGAGGTCGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGCCTACCACAGGGAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGGACTGGGATTGTGATAGGGTTCATTGACACTGGCATTGACCCTGCACACCCCAGCTTTGCTGATGATTTGACTGATAATCCTTTTCCCATTCCGGCCCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTAGGAGCGCGCCATTTTGCAGCCTCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACTGCTTCAATAGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTTCCGGACATCACTTTGGAAACGCGAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGGGTGGATATTATAAGTCTATCAATCACACCGAATAGGCGTCCCCCTGGTATTGCAACGTTTTTTAATCCCATAGACATGGCACTGCTCTCTGCAGTAAAGGCAGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCATCCTTCAGTCCCTGGATCTGTACTGTTGGTGCTGCTTCTCATGATAGAAGCTATGCTAACTCTATAACCCTTGGCAATAATGTCACCATCCTTGGGGTTGGACTTGCACCTGGAACTTATAATGACACAAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGACACAAATGTTTCGGAGGACATGTACGTGGGTGAATGCCAAGACTCCAGTAACTTTGATCGGGACCTGATTGAAGGGAACCTTTTAATATGCAGCTACTCGATCAGATTTGTGCTCGGGCTTTCCACGGTTAAACAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTCGGCTTAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGCATATCTGGAGGATTAAAGGCAAATTATAGCTCCACTGCCCCACAAATTATGTATTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGCAATTTCATATGGGCTGCCTGGAGCTCTGTTGCCACTGACTCTGTCGAATTTCTCGGTGAAAACTTCGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACTGCTTCTCTTTACGATAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTACGCTAACCCCGAACAGAACCAGTCTCCAGCTACACCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACTGCAGCTCTCAACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGCGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCTAGCATCAGTGGAGCTGATCTGAACTTGCCCTCTGTCACGATAGCGAAACTTAACCAGTCGAGAGTAGTACAACGGACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCGACTCGATTTACAATCGGCAGTGGCGAGAAACAACAGTTGACGATATTCTTCAATGCAACGATGAACAGCTCGACTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAATGCAGGCCATATTATCAACATTCCTCTTTCAGTGATTTTGAAGATCTCATATAACAATACCACTAATTGA | 2523 | 44.0 | MEIIHCARLLCVVFCFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSTSSGLSIHKPRKISRKHRRYRSYIARVHDSLLNKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRREVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGTGIVIGFIDTGIDPAHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVSGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWICTVGAASHDRSYANSITLGNNVTILGVGLAPGTYNDTKYKLIAAIHALNNDTNVSEDMYVGECQDSSNFDRDLIEGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASISGGLKANYSSTAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQQLTIFFNATMNSSTASFGRIGLFGNAGHIINIPLSVILKISYNNTTN | 840 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 55385447 | 55391269 | + | Lag0014121.1 | Lac1g3629 | 597200 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g3629 | 840 | CDD | Peptidases_S8_3 | 142 | 649 | IPR034197 | - | |
Lac1g3629 | 840 | CDD | PA_subtilisin_like | 388 | 523 | - | - | |
Lac1g3629 | 840 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 613 | 623 | IPR023828 | - | |
Lac1g3629 | 840 | Gene3D | Peptidase S8/S53 domain | 169 | 703 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac1g3629 | 840 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 147 | 690 | - | - | |
Lac1g3629 | 840 | Pfam | Fibronectin type-III domain | 736 | 829 | IPR041469 | - | |
Lac1g3629 | 840 | PRINTS | Subtilisin serine protease family (S8) signature | 612 | 628 | IPR015500 | - | |
Lac1g3629 | 840 | PRINTS | Subtilisin serine protease family (S8) signature | 167 | 186 | IPR015500 | - | |
Lac1g3629 | 840 | PRINTS | Subtilisin serine protease family (S8) signature | 247 | 260 | IPR015500 | - | |
Lac1g3629 | 840 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 172 | 183 | IPR023827 | - | |
Lac1g3629 | 840 | FunFam | Subtilisin-like protease SBT1.5 | 169 | 392 | - | - | |
Lac1g3629 | 840 | SUPERFAMILY | Subtilisin-like | 142 | 694 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac1g3629 | 840 | Gene3D | - | 707 | 831 | - | - | |
Lac1g3629 | 840 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 140 | IPR037045 | - | |
Lac1g3629 | 840 | Pfam | Peptidase inhibitor I9 | 34 | 141 | IPR010259 | - | |
Lac1g3629 | 840 | Pfam | Subtilase family | 167 | 662 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac1g3629 | 840 | Gene3D | - | 382 | 550 | - | - | |
Lac1g3629 | 840 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 90 | 794 | IPR045051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1390 | Lac-Chr10:12967072 | Lac1g3629 | Lac-Chr1:55385447 | 6.20E-30 | dispersed | |
Lac1g3629 | Lac-Chr1:55385447 | Lac9g1818 | Lac-Chr9:37984925 | 3.00E-90 | dispersed | |
Lac1g3629 | Lac-Chr1:55385447 | Lac6g2273 | Lac-Chr6:39899532 | 6.70E-191 | transposed |
Pathway information
