Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0020 ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG 759 44.93 MQADVWCSNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSSK 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 209409 217187 - Lag0036658.1 Lac2g0020 597284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0020 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 247 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Lac2g0020 252 FunFam Chlorophyll a-b binding protein, chloroplastic 36 248 - -
Lac2g0020 252 SUPERFAMILY Chlorophyll a-b binding protein 28 249 - -
Lac2g0020 252 Pfam Chlorophyll A-B binding protein 46 221 IPR022796 -
Lac2g0020 252 Gene3D Chlorophyll a/b binding protein domain 36 248 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0087 Lac-Chr10:677428 Lac2g0020 Lac-Chr2:209409 7.20E-32 dispersed
Lac2g0020 Lac-Chr2:209409 Lac9g2258 Lac-Chr9:41942147 6.30E-52 dispersed
Lac2g0020 Lac-Chr2:209409 Lac5g1661 Lac-Chr5:33724674 6.00E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0020 K14172 - csv:101209460 459.914