Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0046 ATGGCGACGGTGGCGATGAAGGGTAAAGTCTGTGTGACAGGCGCTGGTGGGTTCATCGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTCCATGGAACTGTCAGGGAACCCAGTGCTGCCAAATATGATCACTTGAGAAAACTTGAGAAAGGGGCCGAGAATCTGGAACTGTTTAAGGCTGACTTACTGGACTATGAGTCTCTGCGTCCTGCATTTGCAGGGTGTGATGGAGTTTTCCATGTTGCCAGTCCAGTTCCTTCCACAACTTCATCAAATCCAGAGACAGAAGTACTTGAACCTGCTGTAAAGGGCACTCTTAATGTGCTTGAAGCGTGTGTTGAAGCAAAAGTTAAGCGAGTAGTTGTAGTGTCCTCTGGTGCTGCAGTGTTTTTCAATCCAAGTTGGCCTCAAGGTTATACTATGGTTTTATATGGCTATCGATATTCATTATTATTCTTCAAAATTGTACCAGAACTGGTATTTTCTGTCAAAACAGAAGCTGAGAGTGAAGCCTTGGAGTTTGGGAAAAGACGTGGGCTTGACGTGGTCACTATTTGTCCAACCCTCGTTATCGGGCCAATTTTGCAGCCAACAGTCAACTCCAGCAGCTTGGTTCTTCTTAAAATTCTAAAAGAAGGATACGAGTCGATGGAGAACAGGCTACGACTGTTAGTAGATGTACGAGATGTAGCGGAGGGGTTAATTCTTTTATATGAGAAGGCCGAGGCAGAAGGAAGGTACATTTGTACAGCGCATAGCATGGAGACAGGGGAGCTGGTGGACATGTTGAAGAGGAAGTACCCTGATTATAATTATCCAAAGAAGTTGAGTGAAGGGAACAAGGAGTCGACAAGTTTGAGCTCAGAGAAGCTGCAAAGATTGGGTTGGAATTATCGGGCTATAGAAGAGACGCTTGCGGATGCTGTCCAGAGTTTCAAAGGCGCGGCCTTGTTGGACTGA 972 45.88 MATVAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSAAKYDHLRKLEKGAENLELFKADLLDYESLRPAFAGCDGVFHVASPVPSTTSSNPETEVLEPAVKGTLNVLEACVEAKVKRVVVVSSGAAVFFNPSWPQGYTMVLYGYRYSLLFFKIVPELVFSVKTEAESEALEFGKRRGLDVVTICPTLVIGPILQPTVNSSSLVLLKILKEGYESMENRLRLLVDVRDVAEGLILLYEKAEAEGRYICTAHSMETGELVDMLKRKYPDYNYPKKLSEGNKESTSLSSEKLQRLGWNYRAIEETLADAVQSFKGAALLD 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 371556 374904 - Lag0036684.1 Lac2g0046 597310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0046 323 Gene3D - 3 323 - -
Lac2g0046 323 FunFam Dihydroflavonol reductase 7 323 - -
Lac2g0046 323 CDD FR_SDR_e 10 300 - -
Lac2g0046 323 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
Lac2g0046 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 315 IPR050425 GO:0016616(PANTHER)
Lac2g0046 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0046 Lac-Chr2:371556 Lac7g2869 Lac-Chr7:47832551 4.70E-52 dispersed
Lac2g0046 Lac-Chr2:371556 Lac4g2745 Lac-Chr4:46323593 3.60E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0046 - - - 0.0