Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0057 ATGGGACTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAACTGTACCATTTCAAGGCCATCGTCATCGCCGGCATGGGGCTCTTCACCGACGCCTACGATCTCTTCAGCATCACTCCGATCACGACCCTCGTCGGACGTGTCTACTACCACGACCAACACTACGAGACTCCGGCCACCGTCAAATCCGCTATGTTGGCGGTGGCCCTTCTCGGAACGGCCACCGGTCAACTCGTGTTCGGCATACTCGGCGACCGAGTGGGACGGCGGCGCGTGTACGGACTCGCATTGGCGCTGATGGTGCTGAGCTCAATCGGATGTGGATTCTCAATCTGCACCACGCGGAGCTGCGTCCTTCTCAGCCTAGGGTTCTTCAGATTCCTTCTGGGACTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCGAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTTGGGATCTTGGCCAGCTCCACCGTGACGTTGATCGTGTGTTCGATATTCGATCGGGCCTCAAATCACCCGCCGAATGATCGTACGCCCAAGGGGGCGGATATTGCTTGGAGGTTGATTCTCATGCTCGGCGCCGTCCCGGCGGCGATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACAGCTCTAGTAGAGCGGAATGTGGCACAAGCAGCAAAGGACATGGAGAAAGTGTTGGACGTGTCATTGGTTGATATCACAGAAGACAGCCCTCTGTCCCCTTCGCCCCCAAATTTCGGCTTCTTTTCGAACGAGTTTCTCCGTCGCCATGGCCGCGACCTCTTCTCCTGCGCCGCCGCTTGGTTTCTCGTCGACATCGTATTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACCCAATTCCTCCGCCCCAAACAAAACGTCAACGTTTACCGTGACGCCTTCAACGAAGCCAAACTCCAAGCCATCGTCGCCGTCTGTTCCACCATTCCCGGCTACTTCGCCGCCGTCTATTTCATCGACCGATTGGGCCGAGTCAAGATCCAAATCATGGGATTCTTCTTCATGGCGGCCGGCTATCTCGCCATCGCCATCCCCTACGACAGATACTGGGCCTCTGACGAACACAAAATCGGGTTCATGATACTCTATTGCCTCACATTCTTCTTCTCAAACTTCGGCCCCAACACCACCACTTTCATTCTCCCGGCCGAGCTCTTTCCGGCCAGGTTCAGATCGACCTGCCACGGAATCTCCGGTGCGGCCGGGAAAATCGGCGCGATCATTGGCGCCGTCGGGTTCCTATGGGCGTCGCACGACCGTGAAGAGAAAGGAATTGGGATGAAGGCGTCGCTGATGATTCTGGGTGGGGTCAGTCTGGTGGGAGTGGTGGTCACGTATTTCTTCACCAGAGAAACCACTGGAAGGTCGTTGGAAGAGAACGAGAACGAAGATGAATACGCAGGGCTCTGCTTTCTCAGGTGCTTCCGCGACAAAAGCGCTTGCTCGCTTCCGTCCATTGGTGAAGATGACGACATGTCGTCACCTTCCAACTCCAACTCCATTCAAAGTAGTAGACCAATTCGTTAA 1623 55.14 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPITTLVGRVYYHDQHYETPATVKSAMLAVALLGTATGQLVFGILGDRVGRRRVYGLALALMVLSSIGCGFSICTTRSCVLLSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASSTVTLIVCSIFDRASNHPPNDRTPKGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLVDITEDSPLSPSPPNFGFFSNEFLRRHGRDLFSCAAAWFLVDIVFYSSNLFQSKIYTQFLRPKQNVNVYRDAFNEAKLQAIVAVCSTIPGYFAAVYFIDRLGRVKIQIMGFFFMAAGYLAIAIPYDRYWASDEHKIGFMILYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDREEKGIGMKASLMILGGVSLVGVVVTYFFTRETTGRSLEENENEDEYAGLCFLRCFRDKSACSLPSIGEDDDMSSPSNSNSIQSSRPIR 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 428824 431851 + Lag0036695.1 Lac2g0057 597321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0057 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 492 - -
Lac2g0057 540 Pfam Sugar (and other) transporter 23 493 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac2g0057 540 Gene3D MFS general substrate transporter like domains 17 501 IPR036259 -
Lac2g0057 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 485 IPR020846 GO:0022857(InterPro)
Lac2g0057 540 CDD MFS_PhT 22 484 - -
Lac2g0057 540 MobiDBLite consensus disorder prediction 521 540 - -
Lac2g0057 540 SUPERFAMILY MFS general substrate transporter 9 495 IPR036259 -
Lac2g0057 540 MobiDBLite consensus disorder prediction 518 540 - -
Lac2g0057 540 FunFam Inorganic phosphate transporter 1-6 17 500 - -
Lac2g0057 540 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0057 Lac-Chr2:428824 Lac7g0590 Lac-Chr7:4710468 5.90E-148 dispersed
Lac2g0057 Lac-Chr2:428824 Lac11g2617 Lac-Chr11:42174581 3.40E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0057 K08176 - csv:101218554 871.307