Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0063 ATGCGTCCCTTTAGGTACCTCGCCGGCGTGAACTCCTCCGCCATCTCCGACACGGCGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCCCTTCTCTGCGCCTTGATTTGCGTTCTCGGCCTTGTTGCTGTTGCCCGCTGTGCCTGGCTACGCCACCTCGCCGGCGATGGCGGCGGCGCCGCTTCCAATCGTCCTCCTCCACCTCCTGCCTCCAACAAAGGACTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACCGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTTGCGGAGTTCGCTGTCGGTGATGAAATCCGAGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGGCCTGCATCGACACTTGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGCTTTCCGGCGAGCTCGAGTTCGAACGGTGGAACCGATTCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAG 561 58.11 MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDKTNRFLP 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 460278 460838 - Lag0036701.1 Lac2g0063 597327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0063 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 149 IPR013083 -
Lac2g0063 186 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Lac2g0063 186 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 20 167 IPR052788 -
Lac2g0063 186 SMART ring_2 103 144 IPR001841 -
Lac2g0063 186 MobiDBLite consensus disorder prediction 160 186 - -
Lac2g0063 186 CDD RING-H2_EL5-like 102 145 - -
Lac2g0063 186 Pfam Ring finger domain 102 145 IPR001841 -
Lac2g0063 186 SUPERFAMILY RING/U-box 83 151 - -
Lac2g0063 186 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0063 Lac-Chr2:460278 Lac9g0266 Lac-Chr9:4306858 1.80E-24 dispersed
Lac2g0063 Lac-Chr2:460278 Lac5g0036 Lac-Chr5:332875 2.00E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0063 - - - 0.0