Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0068 ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACCCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAAGTGATGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCAGTGGGAAACCTCCCCGACACCTCTCAGTAATGCGGCATAGTGTGAGCTCCATAAAGCTGCTAGGACAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCAGGATACTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATTGATGATCTTGTTGAGCACATCCATGCATGTGCGGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGATGCCGCGGCCTTTGTTAGAAATAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTAGAGAAGGCGATTAAGAGTGCTTTTTTGAAAGCTGATTATGCATTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTAACTGCTTTCATTTGTGGAAGAACAATGATTATTGCGAATGCTGGAGATTGTCGAGCTGTTCTGGGGAGGAGGGGCAAGGCTATTGAGGTGTCGAAGGATCACAAGCCCAACTGTGCATCTGAGAAACTCAGAATTGAGAAGCTCGGTGGAGTGATTTACGATGGCTACCTCAATGGCCAGTTATCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCCAAGGGTTCTGCATGCCCACTGAGTGCAGAGCCAGAGCTGCAGGAATTGCATTTGACGGAGGAAGATGAGTTTCTAATAATGGGCTGCGATGGGCTTTGGGATGTCATGAGCAGTCAATATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGGGAGGCACTAAAGCGCAATACATGCGATAATTTAACCGTTATCGTGGTCTGTTTTTCGGCTGATCCTCCCCCTCGGATAGAAATTCCTCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1161 45.74 MATGIDFSPPFTLLEGGGYNKDNVSATSDESSDSFNSLKQMTSGKPPRHLSVMRHSVSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVFDGHGGTDAAAFVRNNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFICGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELHLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 491992 495257 + Lag0036706.1 Lac2g0068 597332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0068 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Lac2g0068 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Lac2g0068 386 FunFam Probable protein phosphatase 2C 22 76 354 - -
Lac2g0068 386 PANTHER PROTEIN PHOSPHATASE 2C 67 351 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Lac2g0068 386 MobiDBLite consensus disorder prediction 21 44 - -
Lac2g0068 386 MobiDBLite consensus disorder prediction 18 49 - -
Lac2g0068 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Lac2g0068 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Lac2g0068 386 SMART PP2C_4 81 349 IPR001932 -
Lac2g0068 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169(InterPro)
Lac2g0068 386 Gene3D - 76 354 IPR036457 -
Lac2g0068 386 CDD PP2Cc 90 351 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0068 Lac-Chr2:491992 Lac6g2864 Lac-Chr6:46261533 4.10E-87 dispersed
Lac2g0068 Lac-Chr2:491992 Lac2g0532 Lac-Chr2:3980739 1.00E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0068 K14803 - csv:101205355 758.444