Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0068 | ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACCCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAAGTGATGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCAGTGGGAAACCTCCCCGACACCTCTCAGTAATGCGGCATAGTGTGAGCTCCATAAAGCTGCTAGGACAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCAGGATACTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATTGATGATCTTGTTGAGCACATCCATGCATGTGCGGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGATGCCGCGGCCTTTGTTAGAAATAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTAGAGAAGGCGATTAAGAGTGCTTTTTTGAAAGCTGATTATGCATTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTAACTGCTTTCATTTGTGGAAGAACAATGATTATTGCGAATGCTGGAGATTGTCGAGCTGTTCTGGGGAGGAGGGGCAAGGCTATTGAGGTGTCGAAGGATCACAAGCCCAACTGTGCATCTGAGAAACTCAGAATTGAGAAGCTCGGTGGAGTGATTTACGATGGCTACCTCAATGGCCAGTTATCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCCAAGGGTTCTGCATGCCCACTGAGTGCAGAGCCAGAGCTGCAGGAATTGCATTTGACGGAGGAAGATGAGTTTCTAATAATGGGCTGCGATGGGCTTTGGGATGTCATGAGCAGTCAATATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGGGAGGCACTAAAGCGCAATACATGCGATAATTTAACCGTTATCGTGGTCTGTTTTTCGGCTGATCCTCCCCCTCGGATAGAAATTCCTCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA | 1161 | 45.74 | MATGIDFSPPFTLLEGGGYNKDNVSATSDESSDSFNSLKQMTSGKPPRHLSVMRHSVSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVFDGHGGTDAAAFVRNNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFICGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELHLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 491992 | 495257 | + | Lag0036706.1 | Lac2g0068 | 597332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0068 | 386 | Pfam | Protein phosphatase 2C | 92 | 343 | IPR001932 | - | |
Lac2g0068 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 351 | IPR001932 | - | |
Lac2g0068 | 386 | FunFam | Probable protein phosphatase 2C 22 | 76 | 354 | - | - | |
Lac2g0068 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C | 67 | 351 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Lac2g0068 | 386 | MobiDBLite | consensus disorder prediction | 21 | 44 | - | - | |
Lac2g0068 | 386 | MobiDBLite | consensus disorder prediction | 18 | 49 | - | - | |
Lac2g0068 | 386 | SMART | PP2C_SIG_2 | 106 | 351 | IPR001932 | - | |
Lac2g0068 | 386 | SUPERFAMILY | PP2C-like | 85 | 352 | IPR036457 | - | |
Lac2g0068 | 386 | SMART | PP2C_4 | 81 | 349 | IPR001932 | - | |
Lac2g0068 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169(InterPro) | |
Lac2g0068 | 386 | Gene3D | - | 76 | 354 | IPR036457 | - | |
Lac2g0068 | 386 | CDD | PP2Cc | 90 | 351 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0068 | Lac-Chr2:491992 | Lac6g2864 | Lac-Chr6:46261533 | 4.10E-87 | dispersed | |
Lac2g0068 | Lac-Chr2:491992 | Lac2g0532 | Lac-Chr2:3980739 | 1.00E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0068 | K14803 | - | csv:101205355 | 758.444 |