Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0075 ATGGAGTGGCAGAACCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGGCGATGGAGTTGGTGGGCTGTACGTCAAGGTGATGACGGATGAGCAAATGGAGCTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATTTGTGAGCAGCTTGTGGAGATGCACAAGGCAATCACAGCCCAGCAGGACCTTGCCGGAATGAGGCTAGGGAATCTATACTGTGATCCAATAATGGCATCTGCTGCTGGCCACAAGATAACTGCTAGGCAGAGGTGGACGCCGACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGAAATAACTCTACAGCTGACACAACATGGTCAAATTTCAGAAGCAAACGTGTATAATTGGTTTCAAAACAGAAGAGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACAGAAGTTGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAAATTATGAAAATTACATTTCTAAGTCGAGCAACATGTATTCTCAGAGATCTGATTTAGGTGCTGAAATGCTTTCCTTTGATGCACAATCAAATAAAGGGGAGCCCATGTTCCAGTCTTTCGGATCTGGTCATATCAGTCAGATGGCCCCAGCTCAGAATCATAGAAATAATCTGTCAAATGATAAAATGAACGTACCAGACGGCTACACCCCTTACCATGCTTGTGAAGGATATCATTTGGTTGAGTGA 819 44.69 MEWQNQQQQNQTEQLQMQMQVEQLSNGDGVGGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKEITLQLTQHGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQNYENYISKSSNMYSQRSDLGAEMLSFDAQSNKGEPMFQSFGSGHISQMAPAQNHRNNLSNDKMNVPDGYTPYHACEGYHLVE 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 546263 547816 - Lag0036713.1 Lac2g0075 597339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0075 272 ProSiteProfiles 'Homeobox' domain profile. 94 159 IPR001356 GO:0003677(InterPro)
Lac2g0075 272 MobiDBLite consensus disorder prediction 156 188 - -
Lac2g0075 272 SMART HOX_1 96 163 IPR001356 GO:0003677(InterPro)
Lac2g0075 272 CDD homeodomain 98 160 IPR001356 GO:0003677(InterPro)
Lac2g0075 272 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 269 IPR044559 GO:0003700(InterPro)
Lac2g0075 272 Gene3D - 100 164 - -
Lac2g0075 272 Pfam Homeodomain 98 158 IPR001356 GO:0003677(InterPro)
Lac2g0075 272 MobiDBLite consensus disorder prediction 173 188 - -
Lac2g0075 272 SUPERFAMILY Homeodomain-like 97 160 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3374 Lac-Chr1:53346314 Lac2g0075 Lac-Chr2:546263 2.00E-12 dispersed
Lac2g0075 Lac-Chr2:546263 Lac5g0057 Lac-Chr5:496642 4.10E-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23416 PF00046 Homeodomain 4.90E-18 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0075 - - - 0.0