Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0075 | ATGGAGTGGCAGAACCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGGCGATGGAGTTGGTGGGCTGTACGTCAAGGTGATGACGGATGAGCAAATGGAGCTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATTTGTGAGCAGCTTGTGGAGATGCACAAGGCAATCACAGCCCAGCAGGACCTTGCCGGAATGAGGCTAGGGAATCTATACTGTGATCCAATAATGGCATCTGCTGCTGGCCACAAGATAACTGCTAGGCAGAGGTGGACGCCGACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGAAATAACTCTACAGCTGACACAACATGGTCAAATTTCAGAAGCAAACGTGTATAATTGGTTTCAAAACAGAAGAGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACAGAAGTTGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAAATTATGAAAATTACATTTCTAAGTCGAGCAACATGTATTCTCAGAGATCTGATTTAGGTGCTGAAATGCTTTCCTTTGATGCACAATCAAATAAAGGGGAGCCCATGTTCCAGTCTTTCGGATCTGGTCATATCAGTCAGATGGCCCCAGCTCAGAATCATAGAAATAATCTGTCAAATGATAAAATGAACGTACCAGACGGCTACACCCCTTACCATGCTTGTGAAGGATATCATTTGGTTGAGTGA | 819 | 44.69 | MEWQNQQQQNQTEQLQMQMQVEQLSNGDGVGGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKEITLQLTQHGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQNYENYISKSSNMYSQRSDLGAEMLSFDAQSNKGEPMFQSFGSGHISQMAPAQNHRNNLSNDKMNVPDGYTPYHACEGYHLVE | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 546263 | 547816 | - | Lag0036713.1 | Lac2g0075 | 597339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0075 | 272 | ProSiteProfiles | 'Homeobox' domain profile. | 94 | 159 | IPR001356 | GO:0003677(InterPro) | |
Lac2g0075 | 272 | MobiDBLite | consensus disorder prediction | 156 | 188 | - | - | |
Lac2g0075 | 272 | SMART | HOX_1 | 96 | 163 | IPR001356 | GO:0003677(InterPro) | |
Lac2g0075 | 272 | CDD | homeodomain | 98 | 160 | IPR001356 | GO:0003677(InterPro) | |
Lac2g0075 | 272 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 1 | 269 | IPR044559 | GO:0003700(InterPro) | |
Lac2g0075 | 272 | Gene3D | - | 100 | 164 | - | - | |
Lac2g0075 | 272 | Pfam | Homeodomain | 98 | 158 | IPR001356 | GO:0003677(InterPro) | |
Lac2g0075 | 272 | MobiDBLite | consensus disorder prediction | 173 | 188 | - | - | |
Lac2g0075 | 272 | SUPERFAMILY | Homeodomain-like | 97 | 160 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g3374 | Lac-Chr1:53346314 | Lac2g0075 | Lac-Chr2:546263 | 2.00E-12 | dispersed | |
Lac2g0075 | Lac-Chr2:546263 | Lac5g0057 | Lac-Chr5:496642 | 4.10E-65 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23416 | PF00046 | Homeodomain | 4.90E-18 | CL0123 | Lac | TF |
Pathway information
