Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0081 ATGAGCTGTTTTCCTTGCCTTCGTGTTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGGAGGGGGAGATCGTATTCAAATGAAACTGGAAAGGGGAAGGAATCACAAACCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCTCGAAGCTTCCCGTTTCGCGAACTGGCGACGGCCACAAGAGGTTTCAAGGAAGTGAATTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGATACAGGCCAGGTTGTTGCGATTAAACAACTCAATCATGATGGTCTTCAAGGATTTCAGGAATTCATCGTCGAAGTTCTCATGTTAAGCTTATTGCATCACTGTAATCTTGTTACTTTGATCGGTTATTGTACTGATGGAGATCAAAGATTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTCCCCCAACCGACCGCCATTGAGTTGGAACACTCGAATCAAGATTGCTCTTGGTGCAGCCCGGGGCCTCGAGTATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCGAATATTTTACTGGACGATGACTTCAATCCAAAGCTCTCGGATTTCGGACTGGCAAAGTTAGCACCGGTTGGTGACAACACCCATGTTTCCACCAGAGTGATGGGAACATATGGTTATTGTGCTCCAGAATATGCCATGAGCGGCAAACTGACACTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCTATAGACTCCTCCAAGAAACCTGGAGAGCAAAATCTAGTTGCTTGGTCTCGCCCTTTTCTTAAAGACCGGAGGAATTTCGTTCAATTAGTCGATCCACTGCTGGAAGGACGCTACCCTCTGCGTTGTCTACACCATGCCATCGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGACCAATCATCAGTGATATCGTTGTGGCCCTTGAGTACTTAGCTTCTCAGAGTTACACATCAGAACAAATGAGGGACGGGGTGCCTAGTCCCTCCAAACTACTATCTCCTCAAAAGGACAGTAGTGCCCACGTTCAAGAGTCAAGATGTGGAAAGAGTTCAAAATCCAAGTAA 1161 46.08 MSCFPCLRVRCKDASKVEIDNGSGRGRSYSNETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLDTGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPNRPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLAPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDSSKKPGEQNLVAWSRPFLKDRRNFVQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYTSEQMRDGVPSPSKLLSPQKDSSAHVQESRCGKSSKSK 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 571877 573937 + Lag0036719.1 Lac2g0081 597345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0081 386 MobiDBLite consensus disorder prediction 351 386 - -
Lac2g0081 386 SMART serkin_6 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0081 386 PANTHER OS07G0668900 PROTEIN 37 365 - -
Lac2g0081 386 FunFam probable serine/threonine-protein kinase RLCKVII 37 142 - -
Lac2g0081 386 CDD STKc_IRAK 73 341 - -
Lac2g0081 386 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0081 386 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
Lac2g0081 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g0081 386 MobiDBLite consensus disorder prediction 24 48 - -
Lac2g0081 386 MobiDBLite consensus disorder prediction 22 50 - -
Lac2g0081 386 FunFam Serine/threonine-protein kinase PBS1 143 356 - -
Lac2g0081 386 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0081 386 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Lac2g0081 386 Gene3D Transferase(Phosphotransferase) domain 1 143 359 - -
Lac2g0081 386 MobiDBLite consensus disorder prediction 363 378 - -
Lac2g0081 386 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0081 Lac-Chr2:571877 Lac7g0849 Lac-Chr7:6877120 1.30E-128 dispersed
Lac4g2753 Lac-Chr4:46390041 Lac2g0081 Lac-Chr2:571877 1.00E-68 dispersed
Lac8g1144 Lac-Chr8:24508255 Lac2g0081 Lac-Chr2:571877 1.40E-61 dispersed
Lac9g2257 Lac-Chr9:41932067 Lac2g0081 Lac-Chr2:571877 1.70E-67 dispersed
Lac2g0081 Lac-Chr2:571877 Lac5g0050 Lac-Chr5:428892 5.20E-82 wgd
Lac2g0081 Lac-Chr2:571877 Lac6g0091 Lac-Chr6:781329 1.90E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85970 PF00069 Pkinase 5.20E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0081 - - - 0.0