Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0092 ATGTGCGGACATATATCCGCTGTTTACGTCTCAATTTCGCTTATGCAGTTTGGAATTCGGATTTCTATTCTCTCTTTCTTAATTCCCATCTTTTCTTTTGCCTTCTTTTGCTCTAAACAACGACCAGAGAGAGAAGAGGGATCGACCCACTTCGAGACTGTGACAGTGGGGCGGAGAGAATCGGCGGCGTCGGCGGAGGACGGCGGAGAGAGAGGGAGAGAGATCGCTCCGGCTACTAATGGAAGTTTTTCGAAGTTGTCTCTCTCTCGCTTGTTTGAAAGCGGAAGCACCGGCTGGCACCCATTAGCAACTGTGAAGGAAATGGCTGGATCGGACGAGAACAACCCGAGAGTGATCGGACGGCCAAATCTCCATGGGAGTTTACGAGTTGGTGGTGGCGGTGGTGGCAAATTTGTAGCGGGGGTGGGTCAAAATCGCAGAGCTTTGAGCAGCATTAATGGCAATGTTACAGCAGCTCCTCCCCCTCATCCCTGTGCAGTCCTCAAAAAAGGCCTAACAGAAACTGATGTTGCTCTCAACAATAAAGACCCTCCGATTCCGATTCATCGACCAATCACTCGGAAGTTTGCTGCTCAGCTGGCTAATAAGCAGCAGCAACCTGTACCTGAGGTTGATAGAAAGCCACTACAATCTGTCCCAATTCGAAAAGAATCTTTAGATCATCATACCATCATAGAGGAAGATGATTCTATGGGAGATTCAGCAGTACCAATGTTTGTACAGCATACAGAAGCAATGTTGGACGAAATTGACAGAATGGAGGAAGTGGAAATGGAAGATATAGAAGAAGAGCCAGTAATTGACATAGACTGCAGCGATAAGAAGGATCAACTAGCTGTTGTGGAGTACATTGACGACTTGTATGCTTACTACAGGAAAGCTGAGGTTTCTGGCTGTGTCCCACCGAACTACATGGCTCAGCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGTACATTACAAGTTTGAGTTGATGGAGGAGACATTGTACCTAACAGTCAACCTGATCGATAGATTCTTGGCGGTTCAGTCGGTGGTGAGGAAGAAGCTCCAGCTTGTTGGGGTGACGGCTATGCTCATTGCCTGCAAGTATGAAGAAGTTTCTGTGCCTGTTGTGGATGACCTCATTCTCATATCTGACAAGGCCTACAGCCGGAAAGAAGTTCTGGACATGGAGAAGTTGATGATAAACACCTTACAGTTCAATCTGTCTGTTCCAACACCTTATGTCTTCATGAGGAGGTTTCTCAAAGCTGCTCAATCTGATAGAGAGCTGGATCTGCTCTCATTCTTCATGGTGGAGCTCTGTTTGGTGGAATATGAAATGCTGAAGTATAGACCTTCATTAATGGCTGCTGCTGCAGTCTTCACTGCTCAATGTACCATCAATGGCTTCAAAGAATGGAGCAAAACCAGTGAATGGCACACTGGATATTCACAGGAACAGCTTCTGGAATGTTCACGTTTGATGGTGGGGTTCCATCAGAAAGCAGGGACAGGGAAATTGACAGGAGTTCACAGGAAGTATTGCACATCCAAGTTTGGATATGCTGCAAGAAGTGAACCAGCAAACTTTCTGTTGGAAGAAAGGCTATAG 1641 46.31 MCGHISAVYVSISLMQFGIRISILSFLIPIFSFAFFCSKQRPEREEGSTHFETVTVGRRESAASAEDGGERGREIAPATNGSFSKLSLSRLFESGSTGWHPLATVKEMAGSDENNPRVIGRPNLHGSLRVGGGGGGKFVAGVGQNRRALSSINGNVTAAPPPHPCAVLKKGLTETDVALNNKDPPIPIHRPITRKFAAQLANKQQQPVPEVDRKPLQSVPIRKESLDHHTIIEEDDSMGDSAVPMFVQHTEAMLDEIDRMEEVEMEDIEEEPVIDIDCSDKKDQLAVVEYIDDLYAYYRKAEVSGCVPPNYMAQQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYSRKEVLDMEKLMINTLQFNLSVPTPYVFMRRFLKAAQSDRELDLLSFFMVELCLVEYEMLKYRPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLLECSRLMVGFHQKAGTGKLTGVHRKYCTSKFGYAARSEPANFLLEERL 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 703334 706321 + Lag0036730.1 Lac2g0092 597356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0092 546 CDD CYCLIN_AtCycB-like_rpt2 421 537 - -
Lac2g0092 546 SMART Cyclin_C_2 421 538 IPR004367 -
Lac2g0092 546 SUPERFAMILY Cyclin-like 420 539 IPR036915 -
Lac2g0092 546 Pfam Cyclin, C-terminal domain 421 537 IPR004367 -
Lac2g0092 546 Pfam Cyclin, N-terminal domain 293 419 IPR006671 -
Lac2g0092 546 ProSitePatterns Cyclins signature. 323 354 IPR048258 -
Lac2g0092 546 SMART cyclin_7 328 412 IPR013763 -
Lac2g0092 546 SMART cyclin_7 425 507 IPR013763 -
Lac2g0092 546 SUPERFAMILY Cyclin-like 283 418 IPR036915 -
Lac2g0092 546 CDD CYCLIN_AtCycB-like_rpt1 272 416 - -
Lac2g0092 546 FunFam G2/mitotic-specific cyclin-1 397 533 - -
Lac2g0092 546 PANTHER CYCLINS 266 525 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Lac2g0092 546 Gene3D - 307 419 - -
Lac2g0092 546 MobiDBLite consensus disorder prediction 58 78 - -
Lac2g0092 546 Gene3D - 293 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3089 Lac-Chr1:51370896 Lac2g0092 Lac-Chr2:703334 5.10E-135 dispersed
Lac2g0092 Lac-Chr2:703334 Lac9g2754 Lac-Chr9:45728656 4.80E-65 dispersed
Lac2g0092 Lac-Chr2:703334 Lac2g0633 Lac-Chr2:4734814 7.20E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0092 K21777 - csv:101223199 774.237