Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0105 ATGGCGGTCCACGGCGGCGGCGGCGGCGAAGTAGATCCAAGAAGCGGCTTCTGCAAATCCACCAAAATCTTCCACAGCAAACGCCGCCCAATCCCTCTCCCGCCAAACCAATCCCTCGATGCGACGACGTTTATCTCTTCCCGCCCTCACAACGGCAAAATCGCCCTCATCGACGCCGCCACCGGCCACCACATCACCTATTCACAGCTCTGGGAATCCGTCGATTCCGTCGCCTCTTCTCTCTCCGACATGGGCATCCGAAAAGGCCACGTCATCCTCCTCCTCTCTCCAAACTCCATTTTCTTCCCCGTCGTTTGCCTCGCCGTCATGTCCATCGGCGCTATAATCACCACCACAAATCCCCTCAACACCCCACAAGAAATCGCCAAGCAGATCGCCGATTCAAAGCCCATCTTAGCCTTCACGACCCAACAGTTAATCCCCAAAATCGCCAGCTCCAAATTGCCAATCGTCCTGATCGACGGTCAAATCCAAAACTCGGCAGTCAAAATCGTGGCGACATTGAACGATATGATGAGGAAAAAGCCCAGTGGGAGTAGAATTAAGGAACGGGTTGAGCAAAACGACACAGCGACTCTGCTTTATTCGTCTGGAACGACAGGGGCGAGCAAGGGCGTAGTGTCGTCACACAAGAATCTTATTGCTATGGTTCAAGTCGTTGTGACGAGGTTTAAATTGAACGAAGAGGAAGGCACTTTTATTTGTACGGTTCCGATGTTTCATATTTATGGGCTCGTGGCTTTCGCTACGGGGCTGCTGTCTTCAGGATCGACGATCGTCGTCTTGTCCAAATTCGAAATTCATGAAATGTTATCGGCGATCGAGAAGTATAAGGCCACTTATCTGCCGCTTGTGCCGCCGATACTGGTGGCGCTGGTGAACGCCGCCGAGCAAATAAAGGGGAAGTACGATTTGGGGTCGTTGCACACGGCGTTGTCCGGCGGAGCGCCGCTTGGGAAGGAGGTGATCGAGGGTTTTGTTGAGAAGTATCCGAATGTTTCGATTCTTCAGGGCTATGGATTGACGGAGTCAACCGGAATTGGCGCTTCCACCGATTCTCTGGAGGAGAGCCGCCGGTACGGCACGGCGGGGCTTCTGTCGCCGAGCACCGAGGGGATGATTGTCGACCCGGAAACCGGCGAGGCCCTGCCCGTGAACCGGACCGGGGAGCTTTGGCTGAGAGGGCCCACCGTAATGAAAGGGTATTTTGGTAATGTGGAGGCCACAACCTCAACACTCGACTCAGAGGGATGGTTGAGAACTGGTGATCTGTGTTATATTGATGAAGATGGTTTTATTTTTGTGGTCGATAGGCTTAAGGAACTCATCAAATATAAGGGTTATCAGGTGCCTCCAGCAGAATTAGAGGCGCTGTTACTTACTCATCCTAGTATCTCTGATGCAGCTGTGATTCCATTTCCCGACAAGGAGGTCGGGCAGTATCCAATGGCTTACGTGGTAAGAAAGGGTGAAAGTGACATTTCACATGAAGATGTAATGCAATTTGTGGCAAAACAGGTGGCACCGTACAAGAGAATCCGGCGGGTGGCGTTCGTGGATTCCATTCCCAATAATCCGTCCGTTCTGCGATTGGATTCAATCGAACTCCGACCAGAAAAGTTTTCGCCGCTGCTGTATTGTGATTCTCAGACCACATTCACATCCGTCGTTGCTGGTTCTTGTTTCCGTTGCTTGTTCCATTTTTCGTCTGAAGAGTTGAATAGCATGGCAGACCATTCAAATCCAGGTTCCAGCACCAGCAGTATTTCCGGGGAGACTGCATCTTCGATTATTGAGCTGAACATCAAGACACTAGATTCACATATCTACAGTTTTCAAGTGAATAAAGATATGCCGGTTCAATTATTCAAGGAGAAAATCGCAAATGAAATAGGAATCCCAGTGAATCAGCAACGTTTGATATTCAGGGGAAAGGTCTTAAAGGATGAACACTCTCTTTCTGAGTATCATTTGGAAAATGGACATACGTTGCATTTAGTTGAAAGGCAACCAACTCAGCAACATGCAGCATCTGATAATAGCGCCGGCGATAGACCTGCAAATGTACCTTCATCAACCGGTAACGAAGCTGGAGCTGGTGCCCCTCGAAATCGTGTAGGACAAATTGCACATAGTGTGGTTTTAGGAACATTTAATGTTGGGGATCAAGGTGAAGGCATTGTTCCTGATCTTTCTCGGGTTATTGGGGCAGTTCTGAATTCTATTGGTCTAAGCAGCCAAAATACAAACATCCCAACTGGTATGCAGTCTTCGTTGCCTAACAATCGTGGCACAGCAAGTCAAGGAAATGAAACATTTAGAGGTAATATTGGGGCTGGAGGACAAGCAACGAGTCAGGCACAAACTGGACAGGCATTTCCCAGTCAGCCATCACAAAGTTTTCCCCACGTGATTCAAATTCCACTCGCCAGTGCTGCTGTACCAGTTCCTTCCATTCATGCGCCCATTCCCGATTCTTTGACAACACTTACCGAGTTCATGAATCGGATGGAGTATTTAATGTCTCAAAATGGTGGAGATCTACCCAGTGTGGAACTGCCTACCAATCCCCAAGGTTTGCCAACCACTGAATCTTTGAGCATTGTTTTGCGCCATGCTCAAAGGCTTCTGCGTGATTATGCTTCAGCTTCATTATCTAATGTCGCTGAGCGTTTGGAGCGAAATAGCTCTTCCACTGATCCCACTGTGAGGGGTCAAATTCAGGACGAGTCGGTGCAAGTAGGAGTTATGATGCAACAATTTGGAGCGCTTCTTCTGGAACTTGGCCGTACAATGTTGACACTCCGTATGGGACAGTCATCTGCTGAGTCAGTTGTTAATGCTGGCCCAGCAGTGTATATCTCTCCTCTGGGGCCAAATCCCTTAATGGTTCAGCCTTTTCCCCTTCAAACTAATCCCCTCCTGGGTGGTGCTGTACTACCATCAAACCCAGTGGCTGTTGGTGCAGTTGGTATTGGAACTGCCCCTAGGCACATCAACATTCACATACATGCTGTTGGTACCAGGTCCAACAATGGGGAGAGAGCACCTGCAGAGCGTCAAAGTGTCGGTGGCTCGACTGATTCAGGTGGATCACAGGCACCTCCTGTGAGAAGTGTTATTGAGACTGCTATTCCACATCCATTGGGCATTTCGATTTCTGCTGCCGTGCAACCTGGTGAAGGTGTTTCTTTTTCCCAGTCTACACCTGATTCGGTTTCATTATCCTCCATTATTGCTGATGTCAATTCACGAATTAGAGATTTAGTTGGTAATGTTGGAGGTGGTAGCAATACTGAATCAGGTCAAGTGCAAACGGCAGTTCAGAATTCTTCTATTGGTTCTGGAGCAGGGAGTGAACAGCAAAGTGATACGAAAAGGGATGTGGGTGGAGAGTCGAGTGAGTCATTACCTCGATGCAACCCTGAAATTGGAAGTGATAAGATTGTAAACACAGACAATATTTGTCGAGATACAGGAAGGGCTGTAAACTCAACTGATTTACCAACATGCTCTGGTGGTAGGGGCTCTGAGTTTGTTGGAAGAAATGAAGAAAATTCTCAGAGTCAGGCATCTTGTGAGAAGAGCTCGGGAGCTGGGTCTTCTCAAGCTGTTCCACTTGGACTTGGACTGGGAGGTTTGGAACGGCCGAGGCGAGGCAGGCAGCAAAGTTCACAGGCTAAGGGGAGTAACAGTGGAACCAGCCACAGCCAGGGTCCGACAGGCCAGCAGCTTTTACAATCTCTTGCCTCTAGTGCTTCTATGAATAGGTCAAATGCTCACGAACCCTCAGGCCTACAATCGACTGCTAGCCCAACTGTGGGCAGCAGATCCTTGCACGGGCCAGGTTCTGACAGCCAAATTGATATAGGAAGCAGTATGTCTCAAGTTTTGCAGAGTCCTGCTTTGAATGGACTATTGACAGGGCTTTCGGAGCAAACTGGCGTTGGTTCTCCTGATGTCTTGAGGAACATGTTGCAACAGCTCACGCAGAGCCCTCAGATGAGAAACACAGTCAATCAGATAGCTCAGCAGGTTAACCCTCAAGATCTTGAGCACATGTTTGCTGGGTCAGAAAGAGGCCAAGGTGGCGGTATCGATTTGTCCAGAATGTTCCAACAGATGATGCCAATTGTCTCTCAAGTTCTTGGAGGAGGAGGGCAAGTGCTTGGAGAAGGAGGGCCAAGGCAACCGTCTTCCTCAAACATTGAAAGAGAGCCAAGGCAACCGCCTTCGTCAAATGTCGATAGGGAGCCAAGGTCTGGTAGTGGAGTGGAAACATCTAATGACCAAAATTTTCAGATCGACTCCCAAGATCTTGCTCGAAGGATCACATCTACCAATTCTCCAAGGGATGTCTTCCGAGCTGTAGTTGAGAGTTCAGCTCGGCTTTCTGGCAGTAGTAGCGAAGACATGACAAATGAGTTGTGCTGCGATGAGAGACTTGCTAAGGAATATGTAGAGATGTTATCAAGTGATGTAAACCGACGGCTACAAGGCAATTCAGATCAGGAAAAATGA 4542 48.79 MAVHGGGGGEVDPRSGFCKSTKIFHSKRRPIPLPPNQSLDATTFISSRPHNGKIALIDAATGHHITYSQLWESVDSVASSLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSIGAIITTTNPLNTPQEIAKQIADSKPILAFTTQQLIPKIASSKLPIVLIDGQIQNSAVKIVATLNDMMRKKPSGSRIKERVEQNDTATLLYSSGTTGASKGVVSSHKNLIAMVQVVVTRFKLNEEEGTFICTVPMFHIYGLVAFATGLLSSGSTIVVLSKFEIHEMLSAIEKYKATYLPLVPPILVALVNAAEQIKGKYDLGSLHTALSGGAPLGKEVIEGFVEKYPNVSILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEGMIVDPETGEALPVNRTGELWLRGPTVMKGYFGNVEATTSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPSISDAAVIPFPDKEVGQYPMAYVVRKGESDISHEDVMQFVAKQVAPYKRIRRVAFVDSIPNNPSVLRLDSIELRPEKFSPLLYCDSQTTFTSVVAGSCFRCLFHFSSEELNSMADHSNPGSSTSSISGETASSIIELNIKTLDSHIYSFQVNKDMPVQLFKEKIANEIGIPVNQQRLIFRGKVLKDEHSLSEYHLENGHTLHLVERQPTQQHAASDNSAGDRPANVPSSTGNEAGAGAPRNRVGQIAHSVVLGTFNVGDQGEGIVPDLSRVIGAVLNSIGLSSQNTNIPTGMQSSLPNNRGTASQGNETFRGNIGAGGQATSQAQTGQAFPSQPSQSFPHVIQIPLASAAVPVPSIHAPIPDSLTTLTEFMNRMEYLMSQNGGDLPSVELPTNPQGLPTTESLSIVLRHAQRLLRDYASASLSNVAERLERNSSSTDPTVRGQIQDESVQVGVMMQQFGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPLGPNPLMVQPFPLQTNPLLGGAVLPSNPVAVGAVGIGTAPRHINIHIHAVGTRSNNGERAPAERQSVGGSTDSGGSQAPPVRSVIETAIPHPLGISISAAVQPGEGVSFSQSTPDSVSLSSIIADVNSRIRDLVGNVGGGSNTESGQVQTAVQNSSIGSGAGSEQQSDTKRDVGGESSESLPRCNPEIGSDKIVNTDNICRDTGRAVNSTDLPTCSGGRGSEFVGRNEENSQSQASCEKSSGAGSSQAVPLGLGLGGLERPRRGRQQSSQAKGSNSGTSHSQGPTGQQLLQSLASSASMNRSNAHEPSGLQSTASPTVGSRSLHGPGSDSQIDIGSSMSQVLQSPALNGLLTGLSEQTGVGSPDVLRNMLQQLTQSPQMRNTVNQIAQQVNPQDLEHMFAGSERGQGGGIDLSRMFQQMMPIVSQVLGGGGQVLGEGGPRQPSSSNIEREPRQPPSSNVDREPRSGSGVETSNDQNFQIDSQDLARRITSTNSPRDVFRAVVESSARLSGSSSEDMTNELCCDERLAKEYVEMLSSDVNRRLQGNSDQEK 1513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 785034 799329 + Lag0036743.1 Lac2g0105 597369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0105 1513 Pfam AMP-binding enzyme C-terminal domain 461 534 IPR025110 -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1015 1043 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 677 709 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1021 1043 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 677 705 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1116 1297 - -
Lac2g0105 1513 Gene3D - 595 690 - -
Lac2g0105 1513 SMART ubq_7 605 676 IPR000626 GO:0005515(InterPro)
Lac2g0105 1513 Pfam AMP-binding enzyme 50 410 IPR000873 -
Lac2g0105 1513 Gene3D - 21 447 IPR042099 -
Lac2g0105 1513 FunFam 4-coumarate--CoA ligase 2 448 539 - -
Lac2g0105 1513 Pfam Ubiquitin family 607 677 IPR000626 GO:0005515(InterPro)
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1188 1210 - -
Lac2g0105 1513 FunFam Large proline-rich protein BAG6 597 690 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 762 806 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1401 1445 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1226 1297 - -
Lac2g0105 1513 PRINTS Ubiquitin signature 636 656 IPR019956 -
Lac2g0105 1513 PRINTS Ubiquitin signature 657 678 IPR019956 -
Lac2g0105 1513 SUPERFAMILY Acetyl-CoA synthetase-like 47 534 - -
Lac2g0105 1513 CDD 4CL 33 537 - -
Lac2g0105 1513 Gene3D - 448 545 IPR045851 -
Lac2g0105 1513 FunFam Long-chain-fatty-acid--CoA ligase FadD 25 447 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1391 1445 - -
Lac2g0105 1513 ProSiteProfiles Ubiquitin domain profile. 605 680 IPR000626 GO:0005515(InterPro)
Lac2g0105 1513 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Lac2g0105 1513 SUPERFAMILY Ubiquitin-like 600 678 IPR029071 -
Lac2g0105 1513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 535 - GO:0005777(PANTHER)|GO:0016405(PANTHER)
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1116 1131 - -
Lac2g0105 1513 MobiDBLite consensus disorder prediction 1164 1179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0563 Lac-Chr10:4327415 Lac2g0105 Lac-Chr2:785034 4.00E-126 dispersed
Lac10g0566 Lac-Chr10:4346402 Lac2g0105 Lac-Chr2:785034 1.50E-125 dispersed
Lac11g2462 Lac-Chr11:40805916 Lac2g0105 Lac-Chr2:785034 1.60E-119 dispersed
Lac13g0665 Lac-Chr13:5028590 Lac2g0105 Lac-Chr2:785034 1.10E-125 dispersed
Lac2g0105 Lac-Chr2:785034 Lac7g2419 Lac-Chr7:41297922 3.20E-119 dispersed
Lac2g0105 Lac-Chr2:785034 Lac11g0573 Lac-Chr11:5816331 7.70E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0105 K10526 - csv:101216180 1467.6