Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0127 ATGGCTCAAACGACGCCGAACCACACGCAGACGGTCTCCGGTTGGGCAGCTCATGATTCTTCCGGCAAGATCACTCCATTTACTTTCAAACGCAGAGAAAACGGCCCCGACGACGTGACCATAGAGATTTTGTACTGTGGAATATGTCACACCGATCTTCACTATGCCAAAAACGAGTGGGGCATCACCATGTATCCCGTAGTTCCCGGGCATGAGATGACAGGGGTGATTTCGAAGGTGGGAAGCAATGTGAAGAAGTTCAAAGTAGGGGACAGAGTGGGAGTTGGCTGTATAGCCGCTTCGTGCTTGAACTGTGAGTTCTGCCAAGATTGCCAAGAGAATTACTGCGAAAGTTTGCAGTTCACATACAACGGAATCTTCTGGGATGGGAGCATAACTTACGGCGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTCGTGCACATACCGGAGAGCCTGCCGATGGACGCGGCGGCGCCGCTGCTGTGCGCTGGGATTACAGTGTTCACGCCGATGAAAGACCTTGATCTGATCGAGTCGCCGAGGAAGAAGGTGGGAGTGGTGGGGCTTGGAGGGCTTGGGCACATAGCAGTCAAATTTGCAAAGGCGTTTGGCCACCATGTGACTGTGATCAGCACATCTGCTTCAAAGGAACGAGAGGCCAAAGAGCGCCTTGGCGCTGACGAGTTCATAGTCAGTAAAGATCCTCAGCAAATGCAGAGTAATAGGAGGACGTTGGATTTTATATTGGACACAGTGTCGGCACAGCATTGCGTTGGCGCAATCTTGGAATTGCTGAAAGTAAATGGGACATTGTCCATTGTGGGAGCTCCAGACAAGCCCATCCAATTGCCGTCCTTCCCTCTAATATTTGGGAAAAGGACGGTGAAGGGAAGCATAATAGGTGGAATACAAGAGACACAAGAGATGATGGACTTGTGTGGAAAGTACAACATTACTAGTGATATTGAGGTGATTAAGCCCGACGACATCAACCATGCTATGGAACGTCTCACCAACAACGATGTACGATACCGATTTGTCATCGACATTGCCCAACAGAAAGCTAAATATTAA 1083 49.22 MAQTTPNHTQTVSGWAAHDSSGKITPFTFKRRENGPDDVTIEILYCGICHTDLHYAKNEWGITMYPVVPGHEMTGVISKVGSNVKKFKVGDRVGVGCIAASCLNCEFCQDCQENYCESLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDLDLIESPRKKVGVVGLGGLGHIAVKFAKAFGHHVTVISTSASKEREAKERLGADEFIVSKDPQQMQSNRRTLDFILDTVSAQHCVGAILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKYNITSDIEVIKPDDINHAMERLTNNDVRYRFVIDIAQQKAKY 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 960842 964001 - Lag0036765.1 Lac2g0127 597391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0127 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Lac2g0127 360 FunFam probable cinnamyl alcohol dehydrogenase 15 177 - -
Lac2g0127 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Lac2g0127 360 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Lac2g0127 360 SUPERFAMILY GroES-like 17 177 IPR011032 -
Lac2g0127 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Lac2g0127 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Lac2g0127 360 Gene3D - 15 353 - -
Lac2g0127 360 Gene3D - 166 323 - -
Lac2g0127 360 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Lac2g0127 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491(InterPro)
Lac2g0127 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2761 Lac-Chr1:48760825 Lac2g0127 Lac-Chr2:960842 3.20E-118 dispersed
Lac2g0127 Lac-Chr2:960842 Lac5g2574 Lac-Chr5:44271303 5.90E-96 dispersed
Lac2g0127 Lac-Chr2:960842 Lac9g0322 Lac-Chr9:5203641 9.70E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0127 K00083 - csv:101213170 670.618