Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0129 ATGCACAGCATTTCTTTTTGTTTCTTCGTTTTGGTTTGTGCCATCTTTTTCCTTCTCTCTGAAAATGGTGAAATAGCTGCAGCTGCTCAAGGTGGAAACAATGGCGTTTACATCGTCTACATGGGATCGGCGTCTGGTTCGAGGACCGACTTCCTTCGCCTTCTTAACTCTGTCAACAGGAATCGAAATGCAGTGGTGCACACGTATAAACATGGATTCACAGGATTTGCAGCTCGAATGTCAGAACAGGAAGCCGAGGCCATGAGACATAGACCTGGAGTTGTTTCGGTTTTTCGAGATCCTCTGTTGAAGTTGCACACAACTCATTCGTGGGATTTCTTGATCAGTCAGACAAGTGTGAAGATCGATGCCAATCCTAAATCCGATCCCCCCAGCTCTTCCTCTCAACCATACGATACCATTATCGGCATCTTGGACACCGGAATCTGGCCGGAATCGGAGAGTTTTAACGACAAAGGTATGAAGCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTAGGCAATGACTTCACCTCCTCCAACTGTAATAAAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATACAGTACCACTCACCTCGAGACGAAGCTGGACATGGCACACACGTGGCTTCAACGGCAGCCGGCAGCGCAGTGGCCAATGCTTCCTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTATAGAGTCTGTATGGCCGACGGCTGCCGTGGGTCAGCCATCATGGCGGCGTTTGACGATGCCATCGCCGATGGGGTCGATTGCTTGTCCTTATCTCTCGGTACACCCTACTACTTCAAACAGGGACTGAAGGACGACCCTATTGCCATTGGGGCCTTTCATGCAGTTGAGAAGGGGATTGTAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACCTCTGGATCGGTGGTGAATGACGCGCCATGGATTTTAACAGTAGCTGCCTCCACCATTGATCGGGTTTTTGAATCTGATGTTGTGTTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTGAAAAAATCCCCTGTATACCCACTGATACAAGGCAAGTCAGCCAAGAAAGGAGATGCCAGTGAAGACAGTGCGAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCTGGTGAAGGGGAAGATTGTTATATGCGAAAGCAATGTCGAAGGAGGCGGTTCCAATTGGCAGGGTCAGGCTGAAACGGTGAAGAGTCTTGGAGGGATCGGTGTAGTTTTGATTGATGACCAATCAAAATTAATTGGAGAGAAGTTTGGAACTTTTCCCATGACAGCTATTGGCTCAAAGGATGGTGCTGAGGTCCTCTCCTATGTCAAGTCAAGCGGGAATCCAGTTGCTACAATCCTACCCTCCGTGACCATAATCAACTATAAGCCAGCGCCTGCTATAGCGTACTTTTCATCTAGAGGGCCTAATCCCAAAGTACTAAACATAATGAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCGTGGCTTGGCAATGACTCGAGCTCTACTCCACAAGGAACAAAGTCGCCACTCTTCAATATGATCTCAGGGACTTCAATGTCCTGCCCGCATGTCTCCGGCGTAGTGGCCTTCGTTAAATCTCAAAACCCCACATGGAGCCCCTCAGCAATCAAGTCGGCCATCATGACAACAGGCAAGAAATTAATCTCAGCAATGAAGAAAAAACTATTCTTTTCTTTTGTTGAATTGAATGTTTACTGA 1815 48.48 MHSISFCFFVLVCAIFFLLSENGEIAAAAQGGNNGVYIVYMGSASGSRTDFLRLLNSVNRNRNAVVHTYKHGFTGFAARMSEQEAEAMRHRPGVVSVFRDPLLKLHTTHSWDFLISQTSVKIDANPKSDPPSSSSQPYDTIIGILDTGIWPESESFNDKGMKPIPSRWKGTCMVGNDFTSSNCNKKIIGARFYESSESDGIQYHSPRDEAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCRGSAIMAAFDDAIADGVDCLSLSLGTPYYFKQGLKDDPIAIGAFHAVEKGIVVVCSAGNDGPTSGSVVNDAPWILTVAASTIDRVFESDVVLGNKKVIKGEGINFSALKKSPVYPLIQGKSAKKGDASEDSARICSEDSMDEALVKGKIVICESNVEGGGSNWQGQAETVKSLGGIGVVLIDDQSKLIGEKFGTFPMTAIGSKDGAEVLSYVKSSGNPVATILPSVTIINYKPAPAIAYFSSRGPNPKVLNIMKPDISAPGVNILAAWLGNDSSSTPQGTKSPLFNMISGTSMSCPHVSGVVAFVKSQNPTWSPSAIKSAIMTTGKKLISAMKKKLFFSFVELNVY 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 989593 992682 + Lag0036767.1 Lac2g0129 597393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0129 604 Pfam Peptidase inhibitor I9 36 106 IPR010259 -
Lac2g0129 604 Gene3D - 341 487 - -
Lac2g0129 604 Pfam Subtilase family 140 586 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac2g0129 604 SUPERFAMILY Subtilisin-like 135 586 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac2g0129 604 ProSiteProfiles Serine proteases, subtilase domain profile. 110 604 - -
Lac2g0129 604 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Lac2g0129 604 Gene3D Peptidase S8/S53 domain 139 589 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac2g0129 604 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Lac2g0129 604 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Lac2g0129 604 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lac2g0129 604 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 589 IPR045051 -
Lac2g0129 604 CDD PA_subtilisin_like 347 480 - -
Lac2g0129 604 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Lac2g0129 604 FunFam subtilisin-like protease SBT1.5 341 487 - -
Lac2g0129 604 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Lac2g0129 604 Pfam PA domain 392 465 IPR003137 -
Lac2g0129 604 SUPERFAMILY Protease propeptides/inhibitors 36 102 - -
Lac2g0129 604 CDD Peptidases_S8_3 103 582 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0129 Lac-Chr2:989593 Lac6g0828 Lac-Chr6:7128274 2.00E-141 dispersed
Lac2g0129 Lac-Chr2:989593 Lac6g0258 Lac-Chr6:2099405 6.40E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0129 K25898 - csv:101213415 956.051