Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0130 | ATGACTTTGGATACCGGATCGGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCACTGGAGCATTACAACCAGGACTAGTCTATGAAACTAGTACAATAGACTACTTAAACTTCCTTTGCTATCGAGGTTATAACCTGTCCACCATTAAGAGCATCTCAAATACTGTTCCTGATGGTTTTGATTGCCCCAAGAAATCAACTGCAGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGCATTGACAGGCAAGGAAAGCAAGAAAATAAGCAGAACAGTTACAAATGTTGGTGGAGACGGTGAAACAGTTTACACAGTTAGTGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGATTCCAGAGAAGTTGGAATTTACAAAGAACAATCAGAAGCAGAGTTACAAAGTGGAGTTCACCTCAAAAGTAGCCATACTAAAGGAAGAAGTCTTTGGATCAATAACTTGGACCAATGGAAAATATCGAGTCCGTAGTTCATTTGTCGTAACTAGTAAGAATAGTGATCTAGGAGATGACCTATAA | 558 | 40.5 | MTLDTGSVATPYDYGAGEISTTGALQPGLVYETSTIDYLNFLCYRGYNLSTIKSISNTVPDGFDCPKKSTADYISNMNYPTIAVSALTGKESKKISRTVTNVGGDGETVYTVSVDAPGEVDVKVIPEKLEFTKNNQKQSYKVEFTSKVAILKEEVFGSITWTNGKYRVRSSFVVTSKNSDLGDDL | 185 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 992739 | 993296 | + | Lag0036768.1 | Lac2g0130 | 597394 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0130 | 185 | Pfam | Fibronectin type-III domain | 76 | 174 | IPR041469 | - | |
| Lac2g0130 | 185 | Gene3D | - | 42 | 177 | - | - | |
| Lac2g0130 | 185 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 8 | 171 | IPR045051 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0130 | Lac-Chr2:992739 | Lac6g0828 | Lac-Chr6:7128274 | 1.50E-31 | dispersed | |
| Lac2g0130 | Lac-Chr2:992739 | Lac5g0734 | Lac-Chr5:9543800 | 1.10E-24 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac2g0130 | K25898 | - | csv:101213415 | 286.96 |