Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0135 ATGAGGAAAAGATCGCTTCATCCTGCTGTCTGTAATTTCTTCATCTTCTTCTTTTTACTTCTCTTCTCTGCTTGTTTTTGCTTCGCCAATCGCGATATGGAAGCTCTGTTGAAGATGAAGACCGCCATGATCGTACCGGGGAGGTCGGGCCTCAGTGATTGGGAGCCATCGTGGTCGCCAGATGCTCATTGTGCCTTCTCTGGAGTTTCGTGCGATGGCGATTCTAGAGTTGTTGCGCTTAACGTCTCGAATTTCCGTCTGTTTGGTCGGATTCCGCCGGAGATTGGCATGTTGGAGAAGCTCGTGAACTTGACGTTAGTGAACAACAATCTCACTGGACGGCTTCCTCTCGAAATGGCGAAACTCACGTCGCTTAAGATTCTCAATCTCTCTAACAACGTGTTTCATGATAATTTACCGGCGGAAATCACTCTCGCAATGACGGAACTCGAGGTTTTCGATATCTATAACAACAATTTCAGTGGACCGCTTCCGGTGGAGTTCGCCAAGTTGAAGAACATTAAGTATCTTGACCTCGGCGGATGCTTCTTTACCGATCAGATTCCGGAGGTTTACTCCGAGATGCAGACGCTGGAGGTCTTGAGTCTGAGGGGAAATGCGCTTACTGGAAGAATTCCGGCTAGTTTGGCGCGGTTGAAGAATCTTAGGTATCTTTACGCCGGTTATTTTAACCATTACGATGGCGGAATTCCGCCCGAGTTTGGATCGTTGAGTTCTCTCGAGCTTATCGATTTAGCCAACTGTAATCTCTCCGGTGAAATTCCTCCGAGTTTGGGGAATTTGAAGCACTTACACAGTCTATTTCTACAAGTAAACAATCTTACCGGTCGGATTCCCTCAGAACTTTCCGGTTTAGTTAGCCTTAAGTCACTGGACCTCTCGCTGAACGAACTCACCGGAGAGATACCGGCAAGTTTCGCGGCACTGCAGAACATTACTCTGATCAATTTATTCAGCAACAAACTTCACGGTCCAATTCCTGGTTTCGTCGGTGACTTTCCGTTTCTCGAAGTGCTTCAGTTGTGGAGTAACAACTTCACGCTAGAGCTCCCCGAGAATCTCGGGCGTAACGGAAAACTGTTTCTGCTCGACGTGGCTACAAATCACCTAACTGGGCTCATTCCCCCGGATATATGTAATGGTAGGTTGAAGACTTTGATTCTGTTGGATAATTACTTCTTTGGGCCCATCCCTGAAAAATTAGGCCAGTGCGATTCGCTTACGAAAATCAGAATTGCGGGGAATTTCTTCAATGGAACTGTTCCGGCGGGTTTTTTCAACTTTCCGGCGTTAGAGATGCTCGATATCAGTCATAATTACTTCTCGGGCGCTCTTCCGTCGCACATGTCGGGCGAGTCCCTTGGAAGTTTACTGCTCAGTAACAACCACATCACCGGAGAAATTCCGGCGGCGATTAAGAATTTAGAAAACTTGCAGGTTCTTTCTCTGGAACATAACCAATTCACTGGTCATTTACCTGTACAAATATTTGAATTGAATAAGTTGCTGAAGATCAACATCAGCTTCAACAACATTAGCGGCGAAATTCCACATTCGGTCGTTGAGTGCACGTCTTTAACGTCAATTGATCTCAGTGAAAACTACCTCGTTGGCCAACTTCCCAAAGGAATTTCGTATCTGAAAATCTTGAGCGTCCTCAATTTGTCAAGAAATCAACTGACGGGCCAAATTCCGAATGAAATTCGGTCGATGATGAGTCTTACAACTCTGGATTTGTCATACAACAACTTCTTTGGTAGAATCCCCATCGGCGGTCAGTTTTCGGTATTCAACGTCAGCGCATTCGCCGGGAACCCAGACCTCTGTTTCCCCAACCACGGGCCTTGCGAATCGCTGCACAGCAATTTGAAATCCATTAAGCTAATCATCCCAATCGTTGCGATATTTATCATTCTTTTATGCGTACTCGTCGGAATTTACATCAGGAAGAGAAAGAGGATTCAGAAATCAAAGGCATGGAAACTCACGGCGTTCCAACGCCTGAATTTCAAAGCGGAGGACGTCCTCGAGTGCTTGAAGGAAGAAAATATCATCGGCAAAGGCGGCGCCGGCGTCGTCTACCGTGGATCTATGCCGGACGGCTCCATCGTGGCGATCAAACTGTTGCTAGGAAGTGGCCGGAACGACCACGGTTTCTCAGCCGAAATTCAGACTCTTGGGCGAATCAAGCACCGCAACATCGTCAGGCTCTTGGGGTACGTGTCGAACAGAGACACGAATCTGCTGCTGTACGAGTATATGCCCAATGGGAGCCTGGACCAGCGGCTGCATGGAGTGAAGGGCGGGCATCTGCACTGGGACTTGCGGTACAAGATTGCGATGGAAGCCGCCAAGGGGCTCTGTTACTTGCACCATGATTGTACGCCGCTGATCATTCACAGAGACGTGAAGTCCAATAATATACTGCTGGATAAGTTCTTTGAGGCCCATGTCTCTGACTTTGGGCTAGCCAAGTTCTTGCAGAACGGCGGCGCCTCCGAGTGTATGTCCTCCATTGCCGGCTCCTATGGCTACATCGCTCCAGAATACGCCTACACACTGAAAGTGGACGAGAAGAGCGACGTGTACAGTTTCGGTGTAGTACTGCTAGAACTGATAGCCGGGAGAAAGCCAGTGGGCGATTTTGGCGAAGGCGTGGACATTGTCAGGTGGGTCCTAAAAACCACATCAGAACTCTCTCAGCCGTCCGATGCAGCCTCAGTGTTAGCCGTGGTGGACTCGCGCCTCACCGAATACCCTCTCCAAGACGTCATCCACCTCTTCAAAATAGCCATGATGTGCGTTGAAGAAGACAGCTCTGCAAGGCCAACCATGAGGGAAGTCGTCCACATGCTATCAAATCCCCCAAGGTCTGCCCCTACTCTCATCAACCTTTAA 2919 48.44 MRKRSLHPAVCNFFIFFFLLLFSACFCFANRDMEALLKMKTAMIVPGRSGLSDWEPSWSPDAHCAFSGVSCDGDSRVVALNVSNFRLFGRIPPEIGMLEKLVNLTLVNNNLTGRLPLEMAKLTSLKILNLSNNVFHDNLPAEITLAMTELEVFDIYNNNFSGPLPVEFAKLKNIKYLDLGGCFFTDQIPEVYSEMQTLEVLSLRGNALTGRIPASLARLKNLRYLYAGYFNHYDGGIPPEFGSLSSLELIDLANCNLSGEIPPSLGNLKHLHSLFLQVNNLTGRIPSELSGLVSLKSLDLSLNELTGEIPASFAALQNITLINLFSNKLHGPIPGFVGDFPFLEVLQLWSNNFTLELPENLGRNGKLFLLDVATNHLTGLIPPDICNGRLKTLILLDNYFFGPIPEKLGQCDSLTKIRIAGNFFNGTVPAGFFNFPALEMLDISHNYFSGALPSHMSGESLGSLLLSNNHITGEIPAAIKNLENLQVLSLEHNQFTGHLPVQIFELNKLLKINISFNNISGEIPHSVVECTSLTSIDLSENYLVGQLPKGISYLKILSVLNLSRNQLTGQIPNEIRSMMSLTTLDLSYNNFFGRIPIGGQFSVFNVSAFAGNPDLCFPNHGPCESLHSNLKSIKLIIPIVAIFIILLCVLVGIYIRKRKRIQKSKAWKLTAFQRLNFKAEDVLECLKEENIIGKGGAGVVYRGSMPDGSIVAIKLLLGSGRNDHGFSAEIQTLGRIKHRNIVRLLGYVSNRDTNLLLYEYMPNGSLDQRLHGVKGGHLHWDLRYKIAMEAAKGLCYLHHDCTPLIIHRDVKSNNILLDKFFEAHVSDFGLAKFLQNGGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWVLKTTSELSQPSDAASVLAVVDSRLTEYPLQDVIHLFKIAMMCVEEDSSARPTMREVVHMLSNPPRSAPTLINL 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1047543 1052021 + Lag0036773.1 Lac2g0135 597399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0135 972 Gene3D Transferase(Phosphotransferase) domain 1 761 966 - -
Lac2g0135 972 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Lac2g0135 972 Pfam Protein kinase domain 688 957 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0135 972 Gene3D Phosphorylase Kinase; domain 1 651 760 - -
Lac2g0135 972 Gene3D Ribonuclease Inhibitor 146 231 IPR032675 -
Lac2g0135 972 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lac2g0135 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac2g0135 972 Gene3D Ribonuclease Inhibitor 31 145 IPR032675 -
Lac2g0135 972 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 SMART serkin_6 686 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0135 972 Gene3D Ribonuclease Inhibitor 232 337 IPR032675 -
Lac2g0135 972 SMART LRR_typ_2 244 268 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 122 146 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 554 578 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 482 506 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 340 364 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 195 219 IPR003591 -
Lac2g0135 972 SMART LRR_typ_2 292 315 IPR003591 -
Lac2g0135 972 Gene3D Ribonuclease Inhibitor 338 631 IPR032675 -
Lac2g0135 972 SUPERFAMILY L domain-like 389 621 - -
Lac2g0135 972 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 Pfam Leucine Rich Repeat 294 316 IPR001611 GO:0005515(InterPro)
Lac2g0135 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 232 336 - -
Lac2g0135 972 PANTHER OS04G0122200 PROTEIN 51 144 IPR051809 -
Lac2g0135 972 SUPERFAMILY Protein kinase-like (PK-like) 677 959 IPR011009 -
Lac2g0135 972 SUPERFAMILY L domain-like 71 398 - -
Lac2g0135 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 145 230 - -
Lac2g0135 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 761 970 - -
Lac2g0135 972 ProSiteProfiles Protein kinase domain profile. 686 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g0135 972 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 628 - -
Lac2g0135 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 760 - -
Lac2g0135 972 FunFam Leucine-rich repeat receptor-like kinase 31 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0135 Lac-Chr2:1047543 Lac5g1755 Lac-Chr5:35244923 1.90E-120 dispersed
Lac9g1090 Lac-Chr9:25645348 Lac2g0135 Lac-Chr2:1047543 1.20E-10 dispersed
Lac2g0135 Lac-Chr2:1047543 Lac5g1860 Lac-Chr5:36849506 7.10E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85974 PF00069 Pkinase 5.10E-43 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0135 - - - 0.0