Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0137 ATGGCTCCTCAAATTTCATTCATATTCTATCTCCTCACAATCCAAATTTCAATATCAGGAGTATTATCCACGACTTTCAGCATAGTAAACAAATGTGATTACACAGTTTGGCCGGGAATTCTCACAAACGCCGGAGTTCCACCACTTCCGACTACCGGCTTCGTCCTCGCCTCCGGCGAGTCCAAGACACTCTCCGCTCCGGCTTCATGGGGCGGCCGGTTCTGGGGCCGGACGCACTGCACACAAGACTCCACCGGGAAATTCTCCTGCCTCACCGGCGACTGCGGCTCCGACAAAGTCGAGTGCAGCGGAAACGGCGCGAAGCCGCCGGCAACTCTGGCAGAGTTCACCCTCGACGGCGCCGGCGGGCTGGATTTCTTCGACGTGAGTTTGGTCGACGGTTACAACGTCCCTATGCTGGTCGTCCCACAGGGAGGCACCGGCGAGAAATGTATGAGCACAGGGTGCGTTGTGGATTTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTGACGAGCGTGGACGGCGGACAGAGCGTCGCGTGTAAAAGCGCGTGTGAAGCGTTTAACCAACCGCAATTCTGTTGCAGTGGCGCGTACGGAACTCCCGATACTTGCAAACCCTCTCCCTACTCGCAGGCGTTTAAAAACGCGTGCCCACGCGCTTACAGCTACGCTTACGACGATTTAACCAGCACGTTTACATGTCTGGACGCCGATTATATCATCACATTTTGCCCCTCACCCAACACTAGTCAGAAATCAACTGAAGATCACAACACGGAAGGCCACAACACAAATACACCGGCGATCAACGGCGGCAACGGCACCATGGTTTACGAAGGGGCTGCGTTTGATCTAAGCGGCGCGTCGAGAACCACGCTCCGCCATATTCTTGGCGTGGTCCTTGCCACGGTGGCAATTCTTCAAAGTCGGCAACTCTTTTGA 945 55.24 MAPQISFIFYLLTIQISISGVLSTTFSIVNKCDYTVWPGILTNAGVPPLPTTGFVLASGESKTLSAPASWGGRFWGRTHCTQDSTGKFSCLTGDCGSDKVECSGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPQGGTGEKCMSTGCVVDLNGACPSELKVTSVDGGQSVACKSACEAFNQPQFCCSGAYGTPDTCKPSPYSQAFKNACPRAYSYAYDDLTSTFTCLDADYIITFCPSPNTSQKSTEDHNTEGHNTNTPAINGGNGTMVYEGAAFDLSGASRTTLRHILGVVLATVAILQSRQLF 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1062434 1064017 - Lag0036775.1 Lac2g0137 597401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0137 314 PIRSF PR5 1 285 IPR001938 -
Lac2g0137 314 PANTHER OS03G0233200 PROTEIN 7 246 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Lac2g0137 314 Pfam Thaumatin family 30 246 IPR001938 -
Lac2g0137 314 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Lac2g0137 314 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Lac2g0137 314 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Lac2g0137 314 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Lac2g0137 314 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Lac2g0137 314 MobiDBLite consensus disorder prediction 252 271 - -
Lac2g0137 314 Gene3D Thaumatin 24 246 IPR037176 -
Lac2g0137 314 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Lac2g0137 314 SMART tha2 26 246 IPR001938 -
Lac2g0137 314 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Lac2g0137 314 CDD TLP-PA 25 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0137 Lac-Chr2:1062434 Lac9g1807 Lac-Chr9:37825473 3.60E-97 dispersed
Lac1g3009 Lac-Chr1:50793277 Lac2g0137 Lac-Chr2:1062434 2.50E-79 wgd
Lac2g0137 Lac-Chr2:1062434 Lac5g0110 Lac-Chr5:883127 1.20E-81 wgd
Lac2g0137 Lac-Chr2:1062434 Lac6g0507 Lac-Chr6:4256053 1.70E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0137 - - - 0.0