Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0160 | ATGTCTATAAAACCCTCCGCCATCGCTATTGCCAAAACTCCCCAACTCCCAAACACATCCTCCAAATCTCACCTTCAACGCCGTCTTCCATTTTTCTCCGATTCAAATATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCCGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCCGCCAATCGCATCCCCTCCGACGTACCCGCCGGACACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGTTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTTCAAGCCGAAGAGGAGTACGGGTTCACCAATCAAGGTCCTTTGGCAATCCCCTGCGACGAGTCGGTTTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGCCGAACTCGGGCCGGTTCATGAAATTGGACGATTTTCAGAGTTACTGCCATATCGGAATCAGAACCGGGCTGGATTTATGGCCGGAATCCCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCAATCTGCTCCGGAGAATGCTTATGGAGATGGCAAAACTGGTGGAAGGATCATCCCACCGTGTCGTCCCGAGCCCGAATCGGAGTCGGGACGAAACCCAGAAGGAAGAAGAAAGAGAGAAGAAGAAGAACAACAGCAAGTGTTGCTAATTCGGCTAGAGGGCTATTTGTGTAA | 723 | 53.39 | MSIKPSAIAIAKTPQLPNTSSKSHLQRRLPFFSDSNMSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFMKLDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQNWWKDHPTVSSRARIGVGTKPRRKKKERRRRTTASVANSARGLFV | 240 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1211128 | 1212149 | - | Lag0036798.1 | Lac2g0160 | 597424 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0160 | 240 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 53 | 137 | IPR003676 | GO:0009733(InterPro) | |
| Lac2g0160 | 240 | Pfam | Auxin responsive protein | 52 | 138 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g2151 | Lac-Chr1:42891670 | Lac2g0160 | Lac-Chr2:1211128 | 3.10E-16 | dispersed | |
| Lac2g0160 | Lac-Chr2:1211128 | Lac4g1378 | Lac-Chr4:32021192 | 1.50E-50 | dispersed | |
| Lac2g0706 | Lac-Chr2:5373902 | Lac2g0160 | Lac-Chr2:1211128 | 1.30E-16 | transposed | |
| Lac2g0160 | Lac-Chr2:1211128 | Lac9g1760 | Lac-Chr9:37306112 | 5.60E-50 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac2g0160 | K14488 | - | csv:101216342 | 301.982 |