Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0160 ATGTCTATAAAACCCTCCGCCATCGCTATTGCCAAAACTCCCCAACTCCCAAACACATCCTCCAAATCTCACCTTCAACGCCGTCTTCCATTTTTCTCCGATTCAAATATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCCGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCCGCCAATCGCATCCCCTCCGACGTACCCGCCGGACACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGTTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTTCAAGCCGAAGAGGAGTACGGGTTCACCAATCAAGGTCCTTTGGCAATCCCCTGCGACGAGTCGGTTTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGCCGAACTCGGGCCGGTTCATGAAATTGGACGATTTTCAGAGTTACTGCCATATCGGAATCAGAACCGGGCTGGATTTATGGCCGGAATCCCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCAATCTGCTCCGGAGAATGCTTATGGAGATGGCAAAACTGGTGGAAGGATCATCCCACCGTGTCGTCCCGAGCCCGAATCGGAGTCGGGACGAAACCCAGAAGGAAGAAGAAAGAGAGAAGAAGAAGAACAACAGCAAGTGTTGCTAATTCGGCTAGAGGGCTATTTGTGTAA 723 53.39 MSIKPSAIAIAKTPQLPNTSSKSHLQRRLPFFSDSNMSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFMKLDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQNWWKDHPTVSSRARIGVGTKPRRKKKERRRRTTASVANSARGLFV 240
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 1211128 1212149 - Lag0036798.1 Lac2g0160 597424
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0160 240 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 137 IPR003676 GO:0009733(InterPro)
Lac2g0160 240 Pfam Auxin responsive protein 52 138 IPR003676 GO:0009733(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2151 Lac-Chr1:42891670 Lac2g0160 Lac-Chr2:1211128 3.10E-16 dispersed
Lac2g0160 Lac-Chr2:1211128 Lac4g1378 Lac-Chr4:32021192 1.50E-50 dispersed
Lac2g0706 Lac-Chr2:5373902 Lac2g0160 Lac-Chr2:1211128 1.30E-16 transposed
Lac2g0160 Lac-Chr2:1211128 Lac9g1760 Lac-Chr9:37306112 5.60E-50 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0160 K14488 - csv:101216342 301.982