Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0178 ATGGCCGATGGAGGCTCAGCTTCTGGGAACAACAGAATGTGGTGTTCCATTCCTGAGAGGCTTCAACTGCATGGCGCCATGCTCGCCTTGCAGTTTGGCTACGCTGGCTTCCACGTTGTCTCTAGAGCTGCCCTTAATATGGGCATTAGTAAACTCGTCTTCCTAGTCTACAGGAACATCATTGCCTTTCTCCTCCTCCTTCCCTTTGCATATTTCATCGAAAAGAAGGAGCGCCCTGCCATTACTCTCAATTTTCTTCTTCAGTTCTTCATGCTTGCACTTGTTGGAATCACGGCGAACCAGGGGTTCTACTTGCTAGGTTTGGAGCACACGTCGCCGACGTTTGCATCGGCGATACAAAACTCGGTTCCGGCGATTACGTTCCTGATGGCTGCATTGCTCCGAATAGAACAAGTGCGACTAAACAGAAAAGATGGTATAGCAAAAGTGATGGGAACAATATGCTGTGTTGCCGGGGCCACAGTGATCACTCTATACAAAGGTCCAACAATATACAGCCCAGGTCCTTCGCTGCAAACAGCCACCACCGCACCCATTTTTGCTTCTCTTGGGGACGCTAGCGGCAAAAGCTGGACCCTGGGCTGCGTCTTTTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCACCCGTCTTGAAAAAGTACCCCGCTCGTCTCTCTGTCACTTCTTATACTTGTTTCTTTGGGATAATTCAGTTTGTCATCATCGCTGCCATTGCCGAGAGAGATGCTCAGGCTTGGGTCTTCCACTCTACCGGTGAAATTTTCAGCGTGCTATACGCGGGAGTGGTAGCTTCTGGAATTGCTTTTGCTGTTCAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTCGTCGCTGTTTATCAACCTGTTCAGACTCTCGTTGTCGCTATCATGGCTTCCTTCGCCTTGGGTGAAGAGTTCTACTTGGGCGGGATCATCGGGGCGGTGCTGATCATCACAGGCTTATACTTCGTCCTATGGGGCAAAAGCGAAGAGAGAAAATTTGCCCTTGAGAAGGCTGCGATCCTCTCCGCTCCGGACCACAGTAACAACAGAACACCCGCCCACATCAAGCCCTCCATCACTCAGCCACTTCTCATTCACTCATCAAACGACAACGTTTGA 1161 50.39 MADGGSASGNNRMWCSIPERLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFIEKKERPAITLNFLLQFFMLALVGITANQGFYLLGLEHTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPGPSLQTATTAPIFASLGDASGKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWVFHSTGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIITGLYFVLWGKSEERKFALEKAAILSAPDHSNNRTPAHIKPSITQPLLIHSSNDNV 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1356589 1358659 + Lag0036816.1 Lac2g0178 597442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0178 386 PANTHER WAT1-RELATED PROTEIN 26 350 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac2g0178 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 343 - -
Lac2g0178 386 Pfam EamA-like transporter family 28 164 IPR000620 GO:0016020(InterPro)
Lac2g0178 386 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020(InterPro)
Lac2g0178 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0178 Lac-Chr2:1356589 Lac2g0909 Lac-Chr2:7137708 8.90E-66 dispersed
Lac2g0965 Lac-Chr2:7629148 Lac2g0178 Lac-Chr2:1356589 1.60E-60 transposed
Lac3g0449 Lac-Chr3:3424358 Lac2g0178 Lac-Chr2:1356589 2.30E-108 transposed
Lac2g0178 Lac-Chr2:1356589 Lac6g0461 Lac-Chr6:3765178 1.00E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0178 - - - 0.0