Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0225 | ATGGAGCAACGAAGAACCGATCAGTCGATCACAGACCTTCCTTTACTTCTCTTGCAGTGGCTTTTCCATTTCCCGATGCATCTTCTTCTTGTTGCCGTTCTTCTTCTTCTTGCAATCCTCCTCAAATTTCTCTACTCCACTCTCTGGCTTCCATGGAGAATTCAAATCCACTTCCGAAAGCAGGGCATAACGGGCCCTCCCTACCGTCCGATCATCGGTAACTCTGCCGATATCCGCCGTCTGTTCGCGGAGGCGCAATCCAAGCCGCTTCCGTTTCACCACGACATACTCTGCCGCGCTCTCCCTTTTTACTTCCGGTGGTCCGGCGAGTACGGGAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCACTATCCGACCCGGATCTGATTAAGGAAGTGCTTGTGAATACGCACGGATCTTTTCGGAGGATCCAGTTCAACCCGCTGTCGAAGGTGCTTTTCGGAGAGGGACTGGTCGGACTGGAGGGCGAGAAATGGGTCGCGCGCCGGAGAATTGCAAATCAGGCTTTCAACATCGAGCGTGTAAAGGGGTGGGTACCTGAAATTGTTGCTAGTGTGTCGAATTTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAATGGAGGAGTTTGAATTGGACGTCCATAAAGAACTTCGTCGCCTTTCAGCAGACGTAATTTCAAGAACTGCATTTGGAAGTAACTTTGAAGAAGGCAAGCGCATCTTCAGTTTGCAAGAACAGCAAACACATCTTTTCTCCCAGGCAGTCAGAAGTGTTTATTTTCCTGGCTTCAGATTTTTGCCGACTAAGAAGAACAGAGAAAGGTGGAGCCTGGAGAAAGAAACTCGTGAATCGATAAGAGTGTTGATTGAGACAAACAGCAAAGGAAGGGAAAACTCAACTAATCTACTCAGCCTGTTAATGTCATCGTACAAGAACCAGAATGGGGAAGAAGAAAGACTTGGAGTGGAGGAAATCATTGATGAATGTAAGACATTCTATTTTGCAGGAATGGAAACAACAGCTCATCTTTTAACTTGGGCCCTTCTGCTGCTAGCAAAGCATCAAGAATGGCAAGACAAGGCCCGAGAAGAAGTTCTCGACGTCTGCGGGCATAAAACACCTCCTGCAGCAGAGAATTTGAGTGAACTTAAACTTGTAGGTATGATAATCAACGAAACTCTTCGACTTTATCCTCCCGCGGTGATGTTAACGAGGTGGGCATCGAAACAGCTGACACTAGGAAGCTTAGACATTCCTGCTGGCACAGAGCTCTTCATGGCATTGGCTGCTGTCCACCATGACAAAGATATTTGGGGAGAAGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACATTTAGCTTCGTTTCTTCCATTTTCGTTGGGTCCCAGAATTTGTGTAGGCCAAAACTTGGCGTTGATTGAGGCTAAAGTCGCCCTGGCCATGATAATTCAACGGTTCTCTCTTGCTGTTTCTCCAACCTACACTCATGCCCCAATGCTGTTTATAACTTTACAGCCACAGTTTGGTGCTCAGCTCATCGTTAGAAGCTTATGA | 1581 | 47.38 | MEQRRTDQSITDLPLLLLQWLFHFPMHLLLVAVLLLLAILLKFLYSTLWLPWRIQIHFRKQGITGPPYRPIIGNSADIRRLFAEAQSKPLPFHHDILCRALPFYFRWSGEYGKTFLYWFGSKPRLALSDPDLIKEVLVNTHGSFRRIQFNPLSKVLFGEGLVGLEGEKWVARRRIANQAFNIERVKGWVPEIVASVSNLLEKWEEMKGGMEEFELDVHKELRRLSADVISRTAFGSNFEEGKRIFSLQEQQTHLFSQAVRSVYFPGFRFLPTKKNRERWSLEKETRESIRVLIETNSKGRENSTNLLSLLMSSYKNQNGEEERLGVEEIIDECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLDVCGHKTPPAAENLSELKLVGMIINETLRLYPPAVMLTRWASKQLTLGSLDIPAGTELFMALAAVHHDKDIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNLALIEAKVALAMIIQRFSLAVSPTYTHAPMLFITLQPQFGAQLIVRSL | 526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1727760 | 1730306 | + | Lag0036863.1 | Lac2g0225 | 597489 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0225 | 526 | FunFam | Cytochrome P450 734A1 | 48 | 526 | - | - | |
| Lac2g0225 | 526 | SUPERFAMILY | Cytochrome P450 | 59 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | Gene3D | Cytochrome P450 | 49 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 36 | 518 | IPR050665 | GO:0004497(PANTHER) | |
| Lac2g0225 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g0225 | 526 | Pfam | Cytochrome P450 | 106 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 224 | 242 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0225 | 526 | PRINTS | E-class P450 group I signature | 108 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0177 | Lac-Chr11:1671895 | Lac2g0225 | Lac-Chr2:1727760 | 1.10E-106 | dispersed | |
| Lac2g0225 | Lac-Chr2:1727760 | Lac3g1069 | Lac-Chr3:8766346 | 5.00E-120 | dispersed | |
| Lac2g0225 | Lac-Chr2:1727760 | Lac3g0839 | Lac-Chr3:6698421 | 8.60E-120 | transposed |
Pathway information