Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0248 | ATGGAACCATCTTCTTCCATTTCCTCAACTAAAACCGCAGCCGGAATACTCATCGCCGTTCTCTTGTTTCTCTACGCTCTCTTCAGGGTACTATCTAAAACCTTCACTTCTCAACGCAAGAAACCGCCACCGGAAGCCGGTGGCGCCTGGCCGGTGATCGGCCATCTTCATCTACTAGGTGGGTCTGAACCAGCACACAAAACCTTGGCCAACATGGCGGATGCCTACGGACCAATTTTTACATTGAAAATGGGAATGCACAGAGCCGTGGTTGTGAGCAGTTGGGAAATCGCCAAAGAGTGCTTTACTACAAACGACAAAGTGCTTGCCTCCCGCCCCAAGCTTGTCGCCGCCAAGCACATGGGCTATGATAATACCATGTTTGCCTTCGCCCAATACGGTCCATTCTGGCGCCATATGCGCAAGATAACCACCGTTGAATTTCTCTCTAACCACCGCCTAGACCTTTTCCAAAACGTTCGAAGATTGGAGGTCCATAGCTCGATCAAGAAACTGTATGAGTTATGTGTCAGCAGCCGAAATAATAACGGAGGCGAGAAAGTGTCGGCGGAGATGAAGAAGTGGTTTGGAGACTTAACTTTGAACATGATATTCAGGATGGTGGTTGGAAAGCGATTTTCGGCTGCTTTTGAAGGGAGTGAAGGCGAGCGGTATCAGAAGGCGTTGAGGACATTTCTTGAATTGTTTGGAGTTTTCGTTCCGTCAGATTGGTTTCCATTTCTGAGTTGGTTGGATTTGGGTGGGTATGAGAAGACCATGAAGAAGACAGCCAAGGTCCTCGACGAGGCGCTTGATAAATTGCTTACAGAGCATCGGCAAAGGCAAAATTCTGATAAAGTGGACATGGAGGAGAAGGATTTCATGGACGTCATGTTGTCTACAGTTAAGGATGTTCAAGAACTTTCCACCTACGATGTCGATTCTGTCACCAAATCTACATGCTTGAATCTGATATTGGGTGGAGCAGACACTACACAAGTAACCATGACATGGGCTCTTTCTTTACTCCTCAATAATGAAGAGATATTGAAGAAGGCCCAACTTGAACTAGACCAACAAGTAGGTAAAGAGAGGTTGGTAGAAGAGTCTGATTTGAAAAATTTGTTGTATCTTCACGCTATCATAAAGGAAACGATGCGTTTGTACCCTGCTGGACCACTTGCGGCCTTGCATGAGGCCATGGAAGATTGTACCGTTGCTAATTACTACATCCCTGCAAAGACACGTTTAATAGTGAATCTTAAAAAGCTTCAAAGAGACCCACTTGTATGGGAAGATCCCCATGGATTTCGACCAGAGAGATTTTTTACAACACATACGGATTTCGATGTTAGAGGGAAAAATCCTCAATTGATACCATTTGGGAGTGGTCGAAGAATATGCCCTGGAATTTTGTTTGCTATTCCTGTCATGCAACTTATACTTGCAAATTTGCTTCATGGGTTTGAAATTAGAAGGTCATCTCAAGAACCAGTCAATATGGAAGAGAGTATGGGATTAACTAGTATTAAAACAACCCCACTTGAAGTTGTTTTAATTCCCCGTCTTTCTGCTCAAGCTTATGCGTAA | 1590 | 44.59 | MEPSSSISSTKTAAGILIAVLLFLYALFRVLSKTFTSQRKKPPPEAGGAWPVIGHLHLLGGSEPAHKTLANMADAYGPIFTLKMGMHRAVVVSSWEIAKECFTTNDKVLASRPKLVAAKHMGYDNTMFAFAQYGPFWRHMRKITTVEFLSNHRLDLFQNVRRLEVHSSIKKLYELCVSSRNNNGGEKVSAEMKKWFGDLTLNMIFRMVVGKRFSAAFEGSEGERYQKALRTFLELFGVFVPSDWFPFLSWLDLGGYEKTMKKTAKVLDEALDKLLTEHRQRQNSDKVDMEEKDFMDVMLSTVKDVQELSTYDVDSVTKSTCLNLILGGADTTQVTMTWALSLLLNNEEILKKAQLELDQQVGKERLVEESDLKNLLYLHAIIKETMRLYPAGPLAALHEAMEDCTVANYYIPAKTRLIVNLKKLQRDPLVWEDPHGFRPERFFTTHTDFDVRGKNPQLIPFGSGRRICPGILFAIPVMQLILANLLHGFEIRRSSQEPVNMEESMGLTSIKTTPLEVVLIPRLSAQAYA | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1869079 | 1871038 | - | Lag0036886.1 | Lac2g0248 | 597512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0248 | 529 | PANTHER | CYTOCHROME P450 82C3-RELATED | 19 | 525 | IPR050651 | - | |
| Lac2g0248 | 529 | FunFam | Cytochrome P450 82C4 | 33 | 520 | - | - | |
| Lac2g0248 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g0248 | 529 | Gene3D | Cytochrome P450 | 32 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 199 | 217 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | CDD | CYP82 | 77 | 522 | - | - | |
| Lac2g0248 | 529 | Pfam | Cytochrome P450 | 46 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0248 | 529 | SUPERFAMILY | Cytochrome P450 | 48 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0248 | Lac-Chr2:1869079 | Lac2g0256 | Lac-Chr2:1933022 | 1.30E-203 | dispersed | |
| Lac2g0248 | Lac-Chr2:1869079 | Lac2g0249 | Lac-Chr2:1877529 | 1.20E-76 | tandem | |
| Lac10g0503 | Lac-Chr10:3855639 | Lac2g0248 | Lac-Chr2:1869079 | 3.40E-76 | wgd |
Pathway information