Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0249 ATGCAGAGTATAATATTGGGTGCATTTGATACTACAACAATAACAATCATATGGGTTGTTTCATTACTTCTCAACAATGAAGAAGCACTCAGAAAAGTCCAACTTGAATTAGATGAACAAATTGGAAGAGAAAGACAAGTAAAAGAGTCTGATGTGAAAAACCTTCCATATCTCCAAGCTATTGTGAAGGAAACTCTACGGTTGTATCCTGCTGCGCCACTCTTAGTCCCTCATGAATCTACAGAAGATTGCACAACTGTTGGCTACCACATTCCGGCAGGGACACGCCTCATAATAAATGCTCAAAAGCTCCAAAGGGACCCTCTTGTTTGGGCGGATCCTTGTGAATTTCGACCCGAAAGATTTTTAACAACTCAAAAGAGTTTTGATGTTAGAGGACAAAGCCCCCAATTGATACCATTCGGAAATGGTCGAAGGATGTGTCCTGGGATCTCTTTCGCCCTCCAAATTATACATCTTACGCTTGCAAGCTTGCTTCATGGGTTTAAAATTGGTAGGCCATCAGAAGAACTACTCGACATGGAAGAGAGTATTGGATTGACCAGTGTTAGAAAATCTCCACTCGAAGTTGTTTTAATTCCACGCCTACCCGCCCAAGTTTATGGGTAA 630 41.43 MQSIILGAFDTTTITIIWVVSLLLNNEEALRKVQLELDEQIGRERQVKESDVKNLPYLQAIVKETLRLYPAAPLLVPHESTEDCTTVGYHIPAGTRLIINAQKLQRDPLVWADPCEFRPERFLTTQKSFDVRGQSPQLIPFGNGRRMCPGISFALQIIHLTLASLLHGFKIGRPSEELLDMEESIGLTSVRKSPLEVVLIPRLPAQVYG 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1877529 1878158 - Lag0036887.1 Lac2g0249 597513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0249 209 SUPERFAMILY Cytochrome P450 3 202 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac2g0249 209 PANTHER CYTOCHROME P450 82C3-RELATED 3 205 IPR050651 -
Lac2g0249 209 Gene3D Cytochrome P450 1 198 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 Pfam Cytochrome P450 4 186 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS E-class P450 group I signature 148 171 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac2g0249 209 PRINTS E-class P450 group I signature 138 148 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0249 Lac-Chr2:1877529 Lac2g0256 Lac-Chr2:1933022 3.30E-91 dispersed
Lac2g0248 Lac-Chr2:1869079 Lac2g0249 Lac-Chr2:1877529 1.20E-76 tandem
Lac1g2871 Lac-Chr1:49662443 Lac2g0249 Lac-Chr2:1877529 3.40E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0249 - - - 0.0