Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0256 | ATGGAATTCTCTCACGTCTCCTCATCGGAAGCCGTTGCCGGAATCTTCGCCGTCATCATTTTTCTATACGCTCTCTTCAAGATACATGGGATCAGATTCGGTGCTCAACGGAGGCGGCTGCCACCGGAAGCCAGCGGCGCCTTGCCGCTGATCGGCCACCTTCATCTTCTATCTGGAAAAGAACCAGCCCACATAACCTTCGCCAAAATGGCCGACGCTTTCGGACCAATTTTCACGTTGAGATTGGGAATGTACACAAACTTGATTGTGAGCAACTGGGAAATAGCGAGAGAGTGCTTTACCACAAACGACAGAATTTTTGCCTCTCGTCCAAAGCTAGTGGCGTCAAAGCTGCTTGGCTACAACTATGCTATGTTGGGGTTGAGCCCGTATGGTCCACACTGGCGGCATGTGCGCAAACTAGCCATGCTCGAGCTCTTGACGAACCACCGTCTCGAGCAGCTCCAACACATAAGAATATTCGAAGTTCAGAGCTCGATTAAGAAACTGTATGAACTGTGTGTGGACAGTAGAAATGGAGATGAGAAAGTGTTGGTGGAGATGAAGACGTGGTTTGGAGATATGACTCTGAACACGATATTTAGGATGGTGGTTGGAAAGCGATTCTCAACGGCGGTGGACGGGAATAATGGTAATGAAGAGTATCGGAAGGCGTTGAGAGATTTCTTTGAATGGTTTGGAGTATTTGTTCCTTCAGATTCTTTTCCATTTCTTAAGTGGTTGGATTTGGGAGGACATGAGAAGGCCATGAAGAAGACGGCCAAAGTGCTGGACGAGGTGTTTGATAAATGGCTTGAAGAGCATCGACAGAAGAGGAATAATTTTGGTGAAGTGAAGATGGAGGACCATGACTTCATGGATGTCATGCTTTCTACTGTTAAAGATGACACACAACTTTCTAACTATGATGCTGATACTGTCACCAAGGCTACATGTTTGGCTCTTATATTGGCTGGATCCGACACTACAACGGTAACTATGATATGGGCTCTTTCTCTACTTCTTAACAATCAAGAAGCACTCAAAAGAGCTCAACTTGAACTAGACGAGCAGGTTGGGAGGCAAAGACAAGTGAGAGAGTCTGACGTAAAGAATTTATTGTATCTTCAAGCTATTGTGAAGGAAACATTGCGTTTGTATCCTGCAGCACCGATCCTGCTCCCTCACGAATCAGTAGAGGATTGTATGGTTTCTGGTTACCACGTCCCAGCAGGAACGCGCCTCATAGTGAATGTTCAAAAGCTTCAAAGAGACCCAAAAGTATGGGAGGATCCTTGTGAATTTCGGCCAGAAAGATTTCTAACGAGTGAAAAAGATTTTGATGTTAGAGGACAGAGTCCCCAACTAATACCATTTGGAAGCGGTCGAAGAATGTGTCCTGGAGTCTCATTTGCCCTCCAAGTTATGCATCTAACACTTGCAAATCTACTTCATGGATTTGAAATTAGGAGGCCATCTGAAGAGCCTCTTGACATGGAGGAGAGTGCTGGAATGACGAGTATAAGAAAGAATCTCCTTGAGGTTGTCTTGACTCCACGACTGGCGACTCAAGCTTATGAGTAA | 1584 | 45.58 | MEFSHVSSSEAVAGIFAVIIFLYALFKIHGIRFGAQRRRLPPEASGALPLIGHLHLLSGKEPAHITFAKMADAFGPIFTLRLGMYTNLIVSNWEIARECFTTNDRIFASRPKLVASKLLGYNYAMLGLSPYGPHWRHVRKLAMLELLTNHRLEQLQHIRIFEVQSSIKKLYELCVDSRNGDEKVLVEMKTWFGDMTLNTIFRMVVGKRFSTAVDGNNGNEEYRKALRDFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAKVLDEVFDKWLEEHRQKRNNFGEVKMEDHDFMDVMLSTVKDDTQLSNYDADTVTKATCLALILAGSDTTTVTMIWALSLLLNNQEALKRAQLELDEQVGRQRQVRESDVKNLLYLQAIVKETLRLYPAAPILLPHESVEDCMVSGYHVPAGTRLIVNVQKLQRDPKVWEDPCEFRPERFLTSEKDFDVRGQSPQLIPFGSGRRMCPGVSFALQVMHLTLANLLHGFEIRRPSEEPLDMEESAGMTSIRKNLLEVVLTPRLATQAYE | 527 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1933022 | 1934709 | - | Lag0036894.1 | Lac2g0256 | 597520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0256 | 527 | Pfam | Cytochrome P450 | 46 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | CDD | CYP82 | 75 | 520 | - | - | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 195 | 213 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 418 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 95 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | FunFam | Cytochrome P450 82C4 | 32 | 518 | - | - | |
| Lac2g0256 | 527 | SUPERFAMILY | Cytochrome P450 | 46 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | Gene3D | Cytochrome P450 | 32 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 522 | IPR050651 | - | |
| Lac2g0256 | 527 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0256 | 527 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0248 | Lac-Chr2:1869079 | Lac2g0256 | Lac-Chr2:1933022 | 1.30E-203 | dispersed | |
| Lac2g0249 | Lac-Chr2:1877529 | Lac2g0256 | Lac-Chr2:1933022 | 3.30E-91 | dispersed | |
| Lac2g0252 | Lac-Chr2:1899696 | Lac2g0256 | Lac-Chr2:1933022 | 1.30E-213 | dispersed | |
| Lac2g0253 | Lac-Chr2:1909371 | Lac2g0256 | Lac-Chr2:1933022 | 1.90E-220 | dispersed | |
| Lac2g0254 | Lac-Chr2:1922249 | Lac2g0256 | Lac-Chr2:1933022 | 2.30E-221 | dispersed | |
| Lac2g0256 | Lac-Chr2:1933022 | Lac2g0258 | Lac-Chr2:1955386 | 7.80E-214 | dispersed | |
| Lac2g0255 | Lac-Chr2:1929671 | Lac2g0256 | Lac-Chr2:1933022 | 3.10E-34 | tandem | |
| Lac2g0256 | Lac-Chr2:1933022 | Lac2g0257 | Lac-Chr2:1944472 | 3.30E-164 | tandem | |
| Lac1g0794 | Lac-Chr1:20088517 | Lac2g0256 | Lac-Chr2:1933022 | 2.30E-42 | transposed | |
| Lac10g2545 | Lac-Chr10:39435499 | Lac2g0256 | Lac-Chr2:1933022 | 3.10E-24 | wgd |
Pathway information