Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0265 ATGTTTCTGGCTTCCAACGCCCTTGTGATGAACACGCCGTCTCCCTTGCCGGACCTCTCCTTGCAGATCAGCCTTCCCTCGTCGTTGGCGCCGCCATCTGACAAGGCCAAGCCGAGAAGCTCGCCGACTACCGATTCCGGTTGCAGTGGGAGAAGTGATTTGAGCCATGAGAATGGTTTCTTCCGCTTAGGGTTTGAAGTGGGTGATGTGGGTCTTCCTCCTCCTCCTCCTCGGCGGCATCACCAAGCTTGTAACGTCGTCCAAGGCCGCCGCGACTTCAAACGAAGCGGCGGCGGAGTCGGGTGTGGAGTGAGGAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACTCTTCACGCTCATTTTGTACACGCGGTTGAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTACCGAACAGTGAAGAATACTGTCAAGGGAACAGATGATTGTGGAAGGCCTGAGCTTGAAGCAGATGCTGTTTTATCTTCTTCTTCTTCATTAACTGTTAAAAAATCTAACTTTGAATCGCCTCAGTTGCAGAGAATCCAAAGAAGTAGTTTGGTATCACCAATGCACAAGAGTTGCGAGAGGACCAAGTCAAACGGCGACACTTTCGCTAAATCTAGAGGGATGAAGGTCGATGGAATCAATAGAGATTATCACGAAGCTCTCAGCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGCCAATTTGATTATGTTGACACAAATGAGCTTGCCCTTCTCAATTGCTAA 843 48.64 MFLASNALVMNTPSPLPDLSLQISLPSSLAPPSDKAKPRSSPTTDSGCSGRSDLSHENGFFRLGFEVGDVGLPPPPPRRHHQACNVVQGRRDFKRSGGGVGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDCGRPELEADAVLSSSSSLTVKKSNFESPQLQRIQRSSLVSPMHKSCERTKSNGDTFAKSRGMKVDGINRDYHEALSMQRINLEFTLGRPSCQFDYVDTNELALLNC 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1996249 1999693 - Lag0036903.1 Lac2g0265 597529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0265 280 Gene3D - 110 167 - -
Lac2g0265 280 MobiDBLite consensus disorder prediction 37 52 - -
Lac2g0265 280 SUPERFAMILY Homeodomain-like 108 165 IPR009057 -
Lac2g0265 280 Pfam Myb-like DNA-binding domain 112 163 IPR001005 -
Lac2g0265 280 FunFam Myb family transcription factor 109 167 - -
Lac2g0265 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 164 IPR006447 GO:0003677(InterPro)
Lac2g0265 280 MobiDBLite consensus disorder prediction 22 52 - -
Lac2g0265 280 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 12 266 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0265 Lac-Chr2:1996249 Lac5g0191 Lac-Chr5:1631800 6.30E-29 dispersed
Lac2g0265 Lac-Chr2:1996249 Lac6g0365 Lac-Chr6:3024334 1.20E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23429 PF00249 Myb_DNA-binding 1.30E-05 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0265 - - - 0.0