Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0265 | ATGTTTCTGGCTTCCAACGCCCTTGTGATGAACACGCCGTCTCCCTTGCCGGACCTCTCCTTGCAGATCAGCCTTCCCTCGTCGTTGGCGCCGCCATCTGACAAGGCCAAGCCGAGAAGCTCGCCGACTACCGATTCCGGTTGCAGTGGGAGAAGTGATTTGAGCCATGAGAATGGTTTCTTCCGCTTAGGGTTTGAAGTGGGTGATGTGGGTCTTCCTCCTCCTCCTCCTCGGCGGCATCACCAAGCTTGTAACGTCGTCCAAGGCCGCCGCGACTTCAAACGAAGCGGCGGCGGAGTCGGGTGTGGAGTGAGGAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACTCTTCACGCTCATTTTGTACACGCGGTTGAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTACCGAACAGTGAAGAATACTGTCAAGGGAACAGATGATTGTGGAAGGCCTGAGCTTGAAGCAGATGCTGTTTTATCTTCTTCTTCTTCATTAACTGTTAAAAAATCTAACTTTGAATCGCCTCAGTTGCAGAGAATCCAAAGAAGTAGTTTGGTATCACCAATGCACAAGAGTTGCGAGAGGACCAAGTCAAACGGCGACACTTTCGCTAAATCTAGAGGGATGAAGGTCGATGGAATCAATAGAGATTATCACGAAGCTCTCAGCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGCCAATTTGATTATGTTGACACAAATGAGCTTGCCCTTCTCAATTGCTAA | 843 | 48.64 | MFLASNALVMNTPSPLPDLSLQISLPSSLAPPSDKAKPRSSPTTDSGCSGRSDLSHENGFFRLGFEVGDVGLPPPPPRRHHQACNVVQGRRDFKRSGGGVGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDCGRPELEADAVLSSSSSLTVKKSNFESPQLQRIQRSSLVSPMHKSCERTKSNGDTFAKSRGMKVDGINRDYHEALSMQRINLEFTLGRPSCQFDYVDTNELALLNC | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1996249 | 1999693 | - | Lag0036903.1 | Lac2g0265 | 597529 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0265 | 280 | Gene3D | - | 110 | 167 | - | - | |
Lac2g0265 | 280 | MobiDBLite | consensus disorder prediction | 37 | 52 | - | - | |
Lac2g0265 | 280 | SUPERFAMILY | Homeodomain-like | 108 | 165 | IPR009057 | - | |
Lac2g0265 | 280 | Pfam | Myb-like DNA-binding domain | 112 | 163 | IPR001005 | - | |
Lac2g0265 | 280 | FunFam | Myb family transcription factor | 109 | 167 | - | - | |
Lac2g0265 | 280 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 111 | 164 | IPR006447 | GO:0003677(InterPro) | |
Lac2g0265 | 280 | MobiDBLite | consensus disorder prediction | 22 | 52 | - | - | |
Lac2g0265 | 280 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 12 | 266 | IPR044847 | GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0265 | Lac-Chr2:1996249 | Lac5g0191 | Lac-Chr5:1631800 | 6.30E-29 | dispersed | |
Lac2g0265 | Lac-Chr2:1996249 | Lac6g0365 | Lac-Chr6:3024334 | 1.20E-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23429 | PF00249 | Myb_DNA-binding | 1.30E-05 | CL0123 | Lac | TF |
Pathway information
