Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0271 ATGTATAAAATCCGGTCAAAGTCCCATTTCATCTTCATCCCCTTCCAAACAGCCCTTGGGCTTATCCAAGGTCAACGAGATCTTCCCCAATCCCGCCTCCGACGAGCTTTCATCGCCCTTCAAGCTTGGAAGAAGGCCATTTATTCCGACCCTTTTAACACCACCGCCAATTGGGTCGGTGCCGACGTATGCTCCTACACTGGAGTTTTCTGCGCCCCTGCTCTCGACGACAACAAAATCGAAGTCGTCGCCGGAATCGACCTCAACCATGCCGACATCGCCGGTTACCTGCCCGTCGAGCTCGGTTTGCTGACCGACATTGCGTTGTTTCACATCAACACCAATCGATTCTGTGGCATTGTCCCCTCGAGCTTCTCAAGGTTGATTCTGCTTCACGAACTCGACATTAGCAACAACCGATTCGTTGGCTATTTCCCGGAAGTTGTTGTGAGGATTCCAAATTTGAAATATCTCGACATAAGATACAATGAATTTGAAGGCGAATTGCCTCCTGCACTTTTCACCAAGGAATTGGATGTAATTTTAATCAATAACAATCGATTCACCTCCTGCATTCCAGAGAATTTTGGAGACTCACCGGCGGCGATAATTGTGATCGCCAACAACAATTTCACTGGTTGCATTCCGAAAAGTATTGGAAAAATGGGGAACACGTTGAACCAGTTTGTAATGTTGAACAATGAATTGGCGGGTTGTTTGCCTGCTGAGATTGGACTGCTTGGAAATGCAACGGTTATTGATGTTTCGTCGAATAAATTGAGTGGGATCTTGCCGACGAGCTTCGATGGGTTGAAGAATGTCGAGATTTTGAATATTTCTTCGAATTTTTTGACCGGGGTTGTACCGGAGGGAGTGTGTAATTTGCCCAAATTGGGTAATTTCACATTCTCTTTCAATTACTTCAATGGCGAGGCGGATAGATGCATGCCGCAGAAGAGAACAGATATTTTGTTGGATGATGCCGAGAATTGTTTACCGGAGAGGCCCATGCAGAAGGCAGCCGACACTTGTGGTCCAGTGATTAGCAAGAAAGTTGATTGCAAAGTTGATTGCAGTAAGGATAAGTGCAGCGGAGGACCCGGTCCACTCTCCACCACCACAAGTTTCATCACCCCAACACCGGTTCACTCTCCACCACCAGTGGTTCACTCTCCACCACCGCCGGTTTCATCACCCCCACCACCGGTTCACTCTCCACCACCGCCGGTTTCATCACCCCCACCACCGGTTCACTCTCCACCACCGCCGGTTTCATCACCCCCACCACCGGTTCACTCTCCACCACCGTCGGTTTCATCACCCCCACCACCGGTTCACTCTCCACCACCGCCGGTTTCATCACCCCCACTACCGGTTTCATCACCTCCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCACCTCCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCACCTCCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCTCCACCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCACCTCCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCCCCACCACCGCCCGTTCACTCTCCACCACCACCGGTTTCATCCCCACCACCGCCCGTTTACTCTCCACCACCACCACCACCAGTTTTCTCACCCCCACCACCGGTTTACTCTGCACCTCCACCACCACCAGTCTACTCACCTCCACCACCAGTGCACTCACCTCCACCTCCAGTCCAATCTCCTCCACCTCTGATATTCTCTCCATCGCCACCTTCTCCATCTCCATCGCCTCCTCCTCTAGTTGCCTCTCCACCGCCTCCACTAGAAGACATCATCCTTCCGCCAAACATTGGCTTCCAGTACTCATCACCGCCTCCACCAATGTTTCAGGGCTACTAA 1932 52.17 MYKIRSKSHFIFIPFQTALGLIQGQRDLPQSRLRRAFIALQAWKKAIYSDPFNTTANWVGADVCSYTGVFCAPALDDNKIEVVAGIDLNHADIAGYLPVELGLLTDIALFHINTNRFCGIVPSSFSRLILLHELDISNNRFVGYFPEVVVRIPNLKYLDIRYNEFEGELPPALFTKELDVILINNNRFTSCIPENFGDSPAAIIVIANNNFTGCIPKSIGKMGNTLNQFVMLNNELAGCLPAEIGLLGNATVIDVSSNKLSGILPTSFDGLKNVEILNISSNFLTGVVPEGVCNLPKLGNFTFSFNYFNGEADRCMPQKRTDILLDDAENCLPERPMQKAADTCGPVISKKVDCKVDCSKDKCSGGPGPLSTTTSFITPTPVHSPPPVVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPSVSSPPPPVHSPPPPVSSPPLPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVYSPPPPPPVFSPPPPVYSAPPPPPVYSPPPPVHSPPPPVQSPPPLIFSPSPPSPSPSPPPLVASPPPPLEDIILPPNIGFQYSSPPPPMFQGY 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2041419 2043641 + Lag0036909.1 Lac2g0271 597535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0271 643 Pfam Leucine Rich Repeat 154 173 IPR001611 GO:0005515(InterPro)
Lac2g0271 643 MobiDBLite consensus disorder prediction 570 623 - -
Lac2g0271 643 Gene3D Ribonuclease Inhibitor 37 334 IPR032675 -
Lac2g0271 643 PRINTS Proline rich extensin signature 374 395 - -
Lac2g0271 643 PRINTS Proline rich extensin signature 430 455 - -
Lac2g0271 643 PRINTS Proline rich extensin signature 412 429 - -
Lac2g0271 643 PRINTS Proline rich extensin signature 395 411 - -
Lac2g0271 643 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 481 IPR051582 -
Lac2g0271 643 FunFam Leucine-rich repeat extensin-like protein 1 37 198 - -
Lac2g0271 643 MobiDBLite consensus disorder prediction 570 643 - -
Lac2g0271 643 MobiDBLite consensus disorder prediction 380 555 - -
Lac2g0271 643 Pfam Leucine rich repeat 251 306 IPR001611 GO:0005515(InterPro)
Lac2g0271 643 MobiDBLite consensus disorder prediction 360 555 - -
Lac2g0271 643 Pfam Leucine rich repeat N-terminal domain 39 71 IPR013210 -
Lac2g0271 643 SUPERFAMILY L domain-like 39 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2515 Lac-Chr10:39032431 Lac2g0271 Lac-Chr2:2041419 1.30E-22 dispersed
Lac2g0271 Lac-Chr2:2041419 Lac4g0561 Lac-Chr4:12624701 9.20E-07 dispersed
Lac2g0269 Lac-Chr2:2033572 Lac2g0271 Lac-Chr2:2041419 3.00E-07 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0271 - - - 0.0