Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0303 ATGTCCACGAGGAGTGATCATCATCATACAGTCCCGCTCTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCAGAAATCATACATGGTCAGGCAAGTCAGAGTAAGAAAGGGGAGGATTTTACATTGCTAAAGACGGAATGCGAGAGAGTGGTCGGAGATGGAGTCTCTACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCCGCTGCTATTTATGCTAAGGAGAATCTGTTGAACAACGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGATGAATGGATTGCAGCATTACCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACCACCGTCACCTTCATGATCATTGAGGGATGGGTTGTCACTGTTGCTTCTGTTGGTGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGGCATCTACTACTTATCAGCAGATCATAGACTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCCAGTGGTGGTGAGGTGGGCCGTCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCACGGTCGATTGGTGATATGGATGTTGGCGAGTATATAGTGCCTGTTCCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTTTGTCAAGTGATGGTGTTTGGGATGCTTTATCTGCTGAAACTGCCTTTGACTGTTGCCGGGGGATGCCAGTAGAAACTGCTGCTGCCCAGATTGTAAAAGAAGCAGTACAGTCAAAGGGACTTCGAGATGATACAACATGTATCGTGATTGACATATATCCAAGGGAGAAACCATCCACTGCTTTGCCGCCACCAAAGAAGCAGGGAAAAGGAATGTTTAAATCAATGTTCCGCAAAAAACCTTCTGAATCATCTTCTCAATTTGAGAGGGAATATAATGAGCCAGATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATTCCAAGTATCCTGTCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAATTGAGATCCAACCTCGAGAGGGTATTTCCATATATGCCGGCTCGTCTAACAGAGGGAAATTACGTGCCTGGGATGGGCCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCGTCTGGAGGCAGGAGATGCCAGTTAGAGTTGATTGCTTTTGGATACTGTTTTCTGACATCGGTTTATGATGACATGCTTGCCTCATATCTCGGTGGAAAGCTTTGGATAAAGTCGCCTGTATATGACACTGAAGAGTGA 1395 44.95 MSTRSDHHHTVPLSVLLKRELAIEKIERPEIIHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVVTVASVGDSRCTLESAEGGIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPYVKQVKLSSTGGRVILSSDGVWDALSAETAFDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDIYPREKPSTALPPPKKQGKGMFKSMFRKKPSESSSQFEREYNEPDVVEELFEEGSAMLSERLDSKYPVCNMFKLFVCAVCQIEIQPREGISIYAGSSNRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGGRRCQLELIAFGYCFLTSVYDDMLASYLGGKLWIKSPVYDTEE 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2263492 2267295 + Lag0036941.1 Lac2g0303 597567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0303 464 SMART PP2C_SIG_2 47 294 IPR001932 -
Lac2g0303 464 Gene3D - 33 302 IPR036457 -
Lac2g0303 464 PANTHER PROTEIN PHOSPHATASE 33 293 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac2g0303 464 CDD PP2Cc 40 294 IPR001932 -
Lac2g0303 464 ProSiteProfiles PPM-type phosphatase domain profile. 32 294 IPR001932 -
Lac2g0303 464 SMART PP2C_4 18 292 IPR001932 -
Lac2g0303 464 FunFam probable protein phosphatase 2C 12 33 300 - -
Lac2g0303 464 SUPERFAMILY PP2C-like 39 294 IPR036457 -
Lac2g0303 464 Pfam Protein phosphatase 2C 55 279 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0303 Lac-Chr2:2263492 Lac3g2933 Lac-Chr3:46773876 1.70E-140 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0303 - - - 0.0