Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0312 | ATGGGTCAAATTTTTCTATCTCTTTTGGTCTTTTTTCTCACTCTATTATGGTACATTTCTTTAAAGAGAAACAAGACGGCAGCCATTAGAGATGGAGCTCAGCAGCTCCCTCCTGGTTCTTTAGGTTGGCTTTATATTGGAGAAACCCTTCAACTCTATTCTCAACACCCCGATTTTTTCTTCGCCTCCAAACAGAAAAGGTATGGAGAGATTTTTAAGACGCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCGGAGGCGGCGAGGTTCGTGCTGACACAGGCTCATTTGTTTAAGCCAACTTACCCCAAGAGCAAAGAGGGTTTGATTGGCCCATCTGCCCTGTTTTTTCACCAAGGTGACTATCATAGCCGGCTGAGGAAGCTGGTTCAGAACTCTCTTTCTTTAGACGCCCTCCGGAGTCTGGTGCCCGATATCGACTCCGCCGCCTCCTCCGCCCTCGACTCGTGGGCTGGTGGCCACCTCATTAACACCTTTCATGAAATGAAAAAGATATCCTTTGAAGTTGGGATATTGGCCATTTTTGGCCATTTGGAGGCTGCTTACAAAGAGAACCTCAAAAACAACTACACCATAGTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCCATACAAAAAAGCACTCTCAGCAAGAAAGAGGCTAAGTAAAATCTTAGGTGACATAATCCATGAGAGGAGGGAGAAAAGTGTGGCTGAGAAGGATCTATTGGGGTGCTTTCTCAACTCCATTGATGAAGAAGGTGAAACTATAAGTGATTCTCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCGGCTCAAGACACCACAGCCAGTGTCATGACTTGGATCGTCAAGTACCTCCATGACCAGCCCAAGCTTCTTCAGGCTGTTAAGGCAGAGCAAGAGGAAATTCTTAAACTGAATTGTGAGAATAACCAACAGTTGAATTGGGATCAGACAAGGAAGATGCCCATCAGTTACAAGGTGGTATTGGAGAGCTTGAGAATGGCCAGCATTATATCATTCACTTACAGAGAGGCCGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCCGAAACATCCATCACAGTCCAGAATATTTTGCCGATCCTCACAAATTCGACCCTTCTAGATTCGAGGTTGCACCAAAACCCAATACATTTATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCCAAACTGGAGATTTTGGTCATGATTCATCATCTAGTCACCAAGTTCAGGTGGGAATTGGTTGGTGCGCAAAACGGGGTTCAGCATAGTCCTTTTCCCGTTCCCTTTCAAGGCCTTCCAGCCAGATTTTGGAAGATAGCCCACCAGTAG | 1413 | 45.15 | MGQIFLSLLVFFLTLLWYISLKRNKTAAIRDGAQQLPPGSLGWLYIGETLQLYSQHPDFFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLTQAHLFKPTYPKSKEGLIGPSALFFHQGDYHSRLRKLVQNSLSLDALRSLVPDIDSAASSALDSWAGGHLINTFHEMKKISFEVGILAIFGHLEAAYKENLKNNYTIVDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKSVAEKDLLGCFLNSIDEEGETISDSQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQAVKAEQEEILKLNCENNQQLNWDQTRKMPISYKVVLESLRMASIISFTYREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILVMIHHLVTKFRWELVGAQNGVQHSPFPVPFQGLPARFWKIAHQ | 470 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 2326752 | 2329588 | - | Lag0036950.1 | Lac2g0312 | 597576 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0312 | 470 | PANTHER | CYTOCHROME P450 26 | 35 | 444 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Lac2g0312 | 470 | SUPERFAMILY | Cytochrome P450 | 35 | 465 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | FunFam | Abscisic acid 8 | 26 | 466 | - | - | |
| Lac2g0312 | 470 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 409 | 418 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 268 | 285 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 406 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 416 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 288 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | E-class P450 group I signature | 375 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | Pfam | Cytochrome P450 | 37 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | Gene3D | Cytochrome P450 | 26 | 467 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | P450 superfamily signature | 416 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | P450 superfamily signature | 407 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | P450 superfamily signature | 336 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | PRINTS | P450 superfamily signature | 279 | 296 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0312 | 470 | CDD | CYP90-like | 65 | 463 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0312 | Lac-Chr2:2326752 | Lac4g1633 | Lac-Chr4:35006530 | 2.00E-184 | dispersed | |
| Lac5g2295 | Lac-Chr5:41621638 | Lac2g0312 | Lac-Chr2:2326752 | 2.10E-154 | transposed | |
| Lac2g0312 | Lac-Chr2:2326752 | Lac6g0318 | Lac-Chr6:2614235 | 6.40E-191 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac2g0312 | K09843 | - | csv:101213916 | 827.009 |