Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0342 ATGAATAACACGAATTTCGTCTGCAGTCCTATGGACGTTCTGCCATTATTACCCTCTTCTCAATTGCTGTTTTCTAATAATTCTATCAATTTCAGGCACAGGGTCTCCATTGCTGTAAAACCCAGTTTTCAGAGTTCGTGTAGATGGCGAATTCGAGCCACCGCCGAAAATGGACCTTCATCGGCGTCGACCTCCGAGATCGACATGGTGAGGAACAGAGAGGGGGTTTTTACCGCCAAACAAAGCAAGGTCGTCGTGCTTTGGGATCTCGATAATAAACCCCCTCGTGGGCCGCCGTACGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAGCGATTCGGGCAAGTGGTCGACATGTCGGCATACGCCAATCGCCACGCCTTTATCCATTTGCCACAATGGGTTGTCGAGGAACGCCGCGAGCGTCGGCAATTGGACGTTCTTGAACGCAAAGGGTTAAGCACGCCGTCCGAATCGTACGTCTGTGGGGTTTGCGGTCGCAAGTGCAAAACAAATCTAGACCTCAAGAAGCATTTCAAGCAACTTCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGGTGCCTCAAGGGCAAAAAGCGGCAGCGGTATAAGGAAAGGTTCATATCTGGGAACCATAAGTACAATGAAGCAGCAAGGTCTCTGATTACTCCGAAAGTTGGGTATGGGTTGGCCTCGGAATTGAGACGTGCTGGGGTTTTTGTGAAGACGGTGGAGGATAAGCCACAGGCGGCTGATTGGGCTTTGAAGAGGCAGATGCAACACTCGATGAGTCGTGGTATTGATTGGATGTTTCTGGTTTCGGATGATTCTGATTTCTCAGAGATGTTAAGGAAGGCTAAGGAGGCTAATTTGGGGACTGTGGTGGTTGGTGATCGTGATAGGGCATTGGGTAGGCACGCGGATTTGTGGGTTCCGTGGATGGGAGTTGAAAATGGGGATGTTACAGAGGAGGATTTGGTGCCCAAAAGATGGAGGATGCGGAGAAGCGAGGAGGACTTGGATGAAGATGATGGTTTTTCTGTTTCTCGTTTTTATGGAGACATTGAAGGTGGCAGTGATTTGGAGAGTGTAGTGCAAGAGCTTGCTTCCCCAAGTACAGGGTTCAATGGCTTTAGAATTTCTGCATTTTCAGAAGGGGAAGATGATGAAGAAGAAGATGACGACGAATGGGTTGAAGAAGAAGAAGATGTGGCATCTGACTATCTGCTAGAGATGAGTGACGAGGAAGATGCGTATTTCTGA 1269 49.09 MNNTNFVCSPMDVLPLLPSSQLLFSNNSINFRHRVSIAVKPSFQSSCRWRIRATAENGPSSASTSEIDMVRNREGVFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDVLERKGLSTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRCLKGKKRQRYKERFISGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPKRWRMRRSEEDLDEDDGFSVSRFYGDIEGGSDLESVVQELASPSTGFNGFRISAFSEGEDDEEEDDDEWVEEEEDVASDYLLEMSDEEDAYF 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2561836 2563104 - Lag0036980.1 Lac2g0342 597606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0342 422 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 48 397 - -
Lac2g0342 422 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Lac2g0342 422 CDD PIN_LabA-like 170 300 - -
Lac2g0342 422 Gene3D - 77 316 - -
Lac2g0342 422 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0342 Lac-Chr2:2561836 Lac5g0491 Lac-Chr5:5512452 1.10E-56 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23436 None None None None Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0342 - - - 0.0