Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0367 ATGGCGGATAAGGAGAATATATTTCGAGTCACTCGGGGTTCTAAGAGGAGGGCGGCGGAGGCCGCTACCCCCGACGACCGCTCCGCTAACAAGAGGAGAGTTGTACTCGGAGAGCTTCCTATTTTACAGAATGCAAGTTCTTCCGTCGATCGGAAGTCCAAGCCCAGAGCCACCAGGCAGAGACGGAGAGTAAAATCGAGGGATACAGCGGGGACCAGTGCTGCTGCTGAAACCAATACACTTCCGGAACCTGACTTGAACTTATCGAATGAGGGGAATTCGGACGACCCGCAAATGTGCAGGGTTTACGCCTCTGATATTTATGAGTATCTTCGCGCAATGGAGACTGATCCGAGAAGAAGACCCTTACCAGATTACATCGGGAGGGTACAAAGGGATATAAGTGCCAATATGAGGGGAATTCTAGTGGATTGGTTGGTTGAAGTTGCAGAAGAATACAAACTTGTTTCAGACACCCTCTACCTCTCTATTTCATATGTTGACAGATACTTATCTCTAAATGCAATCAGCAGGCAAAAACTTCAATTGCTAGGCGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATCAGTCCTCCACAAGTTGAAGAATTTGTTTACATCACAGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAGGCTGAAATATTGAAGTCGCTAGAATTTGAACTTGGAAGTCCAACAATAAAGACATTTTTAAGGAGATTCACAATGATTGCTCAAGAGAGTTATGAATTTAATACTTTACAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGCCTACTAGACTACAACTGTGTCAAATTCTTACCGTCTCTCATTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAACCAAAGAAGCATCCTTGGACCTCCAGGTTGGAGCATTTTACTGGATACAAGCCAGCTGATATGAAAGATTGCGTTCTACTGATACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACATAAGTTCAAATTTGTGTCTGTCATGCCTTCACCTCCAGAGATCCCTATTCCATATTTTGAAGATATAGGAATCAGAATTCCAGAGGCACGGTTCAGTTTCGATCTGCACAAGCTCTATGAGGCATTAGCTGATGGGCGAGTGTCCACTTGGAATGGAACATTTTTGTGCACTGGAACGCAAGCCAAAGCATGA 1239 43.58 MADKENIFRVTRGSKRRAAEAATPDDRSANKRRVVLGELPILQNASSSVDRKSKPRATRQRRRVKSRDTAGTSAAAETNTLPEPDLNLSNEGNSDDPQMCRVYASDIYEYLRAMETDPRRRPLPDYIGRVQRDISANMRGILVDWLVEVAEEYKLVSDTLYLSISYVDRYLSLNAISRQKLQLLGVSAMLIASKYEEISPPQVEEFVYITDNTYNREEVVEMEAEILKSLEFELGSPTIKTFLRRFTMIAQESYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLIAASVIFLARFMIQPKKHPWTSRLEHFTGYKPADMKDCVLLIHDLYLSRRGGALAAIREKYKQHKFKFVSVMPSPPEIPIPYFEDIGIRIPEARFSFDLHKLYEALADGRVSTWNGTFLCTGTQAKA 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2751758 2754114 - Lag0037005.1 Lac2g0367 597631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0367 412 FunFam Mitotic cyclin 6 122 222 - -
Lac2g0367 412 ProSitePatterns Cyclins signature. 139 170 IPR048258 -
Lac2g0367 412 Gene3D - 106 356 - -
Lac2g0367 412 SMART cyclin_7 144 228 IPR013763 -
Lac2g0367 412 SMART cyclin_7 241 329 IPR013763 -
Lac2g0367 412 MobiDBLite consensus disorder prediction 1 33 - -
Lac2g0367 412 SMART Cyclin_C_2 237 360 IPR004367 -
Lac2g0367 412 CDD CYCLIN_AtCycA_like_rpt1 96 233 - -
Lac2g0367 412 FunFam Cyclin A1 224 356 - -
Lac2g0367 412 SUPERFAMILY Cyclin-like 237 362 IPR036915 -
Lac2g0367 412 Pfam Cyclin, C-terminal domain 237 359 IPR004367 -
Lac2g0367 412 CDD CYCLIN_AtCycA-like_rpt2 237 351 - -
Lac2g0367 412 MobiDBLite consensus disorder prediction 71 96 - -
Lac2g0367 412 Gene3D - 120 235 - -
Lac2g0367 412 MobiDBLite consensus disorder prediction 1 96 - -
Lac2g0367 412 Pfam Cyclin, N-terminal domain 106 234 IPR006671 -
Lac2g0367 412 PANTHER CYCLINS 86 348 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Lac2g0367 412 SUPERFAMILY Cyclin-like 95 234 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0367 Lac-Chr2:2751758 Lac2g0633 Lac-Chr2:4734814 9.20E-77 dispersed
Lac8g1821 Lac-Chr8:36495788 Lac2g0367 Lac-Chr2:2751758 2.10E-83 transposed
Lac12g0195 Lac-Chr12:2145644 Lac2g0367 Lac-Chr2:2751758 1.40E-86 wgd
Lac2g0367 Lac-Chr2:2751758 Lac6g0270 Lac-Chr6:2177378 9.00E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0367 K06627 - csv:101207493 671.774