Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0370 | ATGGCGATCCCATTTTTATACCTTTTGATCTTATTAACACTTCACATCTTCACAAATCACTTCCTTCACAGAATCCGAAACCTCCCCCCGAGCCCATTTCTTTCTCTACCCATAATAGGCCAACTCTACCTCCTCAAACGCCCTCTTCACCGGACCCTATCGGAAATCTCCCGCCAGCATGGCCCAATTCTCTTCTTCCGGTTCGGATTCCGACCAGTCTTGGTCGTCTCATCCCCGTCAGCCGCCGAGGAGTGCCTCTCCAAAAATGACGTCGTGTTCGCCAACCGCCCTCGACTGATAGGCGGCAAATACCTCGGGTACAATTACACGAGCCTCCTCTGGGCGCCCTATGGCGAGCACTGGCGAAACCTCCGCCGAATCTCATCGTTAGAAATCTTCTCCACCCACCGCCTCCAGACGCTCTCCAGCATTCGCCTCGACGAAGTCCGCATGCTGATTCGGAGGTTGTACAGCGCCAAAAACGACGTCGTGGACCTGAGAACAGAGTTTTTCGAGCTGATGTTCAATATCATGATGAGAATGATTGCAGGAAAACGGTATTATGGGGAGCACGTGGCGGACTCGGAGGAGGCAAGGAGATTTCGCGAGCTTCAAGAGGAAACGTTTCGGTTGAGTAGCAAAACTAATTTGGGGGACTTTTTGCGGGTTGTGAGGTGGGTTGGATTCTCTAAAGGACTCGAAAATAGTATGAGGGAGTTGCAAATCAAAAGGGATGTTTGGATGCAGAGTTTGATCGACGAACATCGGAAACATATGAAAGATAGTAGTTGTTGTTCTAACGAAAAGGATGGTAAAAAGACCATGATCGAAGTTCTCCTGTCGTTGCAAGAAACGGAACCTGAGTATTATAAGGACGATGTTATCCGAGGCCTCATGCTCGTGTTGCTGTTAGCAGGAACAGAGGGTTCCATCAATACAATGGAGTGGCTGCTGTCACTATTACTCAACCACCCAGAGAGTCTTCGAAGGGCCCAAAAGGAAATCGACGACGTGGTGGGAAGATCCAATCGGATGGTGGAGGAATCGGACCTGGCCCATCTTCCTTACCTGCGTAGCCTGATCCACGAGACTCTGAGAATGTACCCGCCCGGCCCATTACTGATCCCCCACGAATCATCAGAGGACTGCCACGTGGGAGGGTTCCAGGTCCCAGCTGGGACGACGCTGTTCGTAAACGTGTGGGCCATCCAAAACGACCCCAGCGTGTGGGTGGAGCCGGAGAAATTCAACCCGGACCGATTTGGAAGCGAGGGAGAGGGGTTCAAGTGGATGCCATTTGGGGCCGGGAGGAGGGGGTGTCCCGGCGAGGGCTTGGGGCTGCGCGTGGTTGGATTGGCCGTCGGATCGCTGGTTCAGTGCTTTGAGTGGGAGGCAGTAGGTGGAAAAGCTATTGATATGACCGAAGGTGTTGGACTCACCTTGCCTAAAGCTCTCCCCCTCCACGCCCTTTGTCGACCTCGTTCAAATGTCGCACATTTACTTCCTCAGATCTTGAATCAAGTATTTCAATGGAAATCGACATTTTTGAGCACTACCGGAGGCGCGCGCATTCGGGGCATCGTCGAGACGCTACCTCCACAGCGTCTCGACGCTGCGAACTTTCCAGATTTAATTAGGGCGTCGCATGACAGCGTCGCGACGCTATGTCCTCAGCGTCTCGACGCTGTCACGCAGAATCGACAGTATTTAAAGAAAACGATGCTTTCAGATTGA | 1734 | 52.25 | MAIPFLYLLILLTLHIFTNHFLHRIRNLPPSPFLSLPIIGQLYLLKRPLHRTLSEISRQHGPILFFRFGFRPVLVVSSPSAAEECLSKNDVVFANRPRLIGGKYLGYNYTSLLWAPYGEHWRNLRRISSLEIFSTHRLQTLSSIRLDEVRMLIRRLYSAKNDVVDLRTEFFELMFNIMMRMIAGKRYYGEHVADSEEARRFRELQEETFRLSSKTNLGDFLRVVRWVGFSKGLENSMRELQIKRDVWMQSLIDEHRKHMKDSSCCSNEKDGKKTMIEVLLSLQETEPEYYKDDVIRGLMLVLLLAGTEGSINTMEWLLSLLLNHPESLRRAQKEIDDVVGRSNRMVEESDLAHLPYLRSLIHETLRMYPPGPLLIPHESSEDCHVGGFQVPAGTTLFVNVWAIQNDPSVWVEPEKFNPDRFGSEGEGFKWMPFGAGRRGCPGEGLGLRVVGLAVGSLVQCFEWEAVGGKAIDMTEGVGLTLPKALPLHALCRPRSNVAHLLPQILNQVFQWKSTFLSTTGGARIRGIVETLPPQRLDAANFPDLIRASHDSVATLCPQRLDAVTQNRQYLKKTMLSD | 577 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 2762378 | 2764682 | + | Lag0037008.1 | Lac2g0370 | 597634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0370 | 577 | Gene3D | Cytochrome P450 | 23 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 57 | 76 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 173 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 81 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | CDD | CYP81 | 61 | 487 | - | - | |
| Lac2g0370 | 577 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 495 | IPR050651 | - | |
| Lac2g0370 | 577 | FunFam | Cytochrome P450 family protein | 21 | 497 | - | - | |
| Lac2g0370 | 577 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g0370 | 577 | SUPERFAMILY | Cytochrome P450 | 29 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0370 | 577 | Pfam | Cytochrome P450 | 30 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0370 | Lac-Chr2:2762378 | Lac2g0888 | Lac-Chr2:6995338 | 4.00E-163 | dispersed | |
| Lac9g0089 | Lac-Chr9:1308809 | Lac2g0370 | Lac-Chr2:2762378 | 1.60E-08 | dispersed | |
| Lac2g0370 | Lac-Chr2:2762378 | Lac2g0371 | Lac-Chr2:2766827 | 1.40E-179 | tandem |
Pathway information