Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g0371 | ATGGGAGTTTTAGGAGCTATATTTTTATACATTCCACTGTTTTTAGTGTTGTACACATTAACAGAGCAGTTTCTTCACAAAATTCGAAACCTCCCGCCGACCCCTTTCCCGTCACTTCCAGTCATCGGCCATCTCCACCTTCTGAACAAGCCCCTCTACCGGACTTTGGCCAAGATCTCGAACCGGTACGGCCCGGTTGTCTTTCTCCGGTTCGGATCACGCCAAGTTCTCGTGGTGTCGTCTCCTTCCGCGGCCGAAGAATGTCTGACCAAGAACGACGTCGTGTTTGCGAACCGGCCTCGCCTCCTCCTATCCAAGTGGTTCGGATACAACAACACCAACCTCGTCTGGTCATCGTATGGGGACCACTGGCGCAACCTCCGCCGAATCTCCACCGTTGAAGTCTTGTCCACTCATCGCCTTCAGATGCTCTCGACCGTCCGTCTCGAAGAGGTCAAGTCTCTGATTCGGAGGCTCGCGAGAAGCGAAACCCAGGTGCATAACATGAAGAATGCGTTTTTCGATCTGACTTATAACATCATGTTGAGGATGATTGTCGGAAAGCGGTTTTACGGTGATGACGTGGACGATGCTGACGAGGCAAGACGTTATAGAGAGTTACAGGCTGAGTCAACTCGATTGAGTGGTAAGTCAAATATAGGAGATTTTATCCCGTTGATGTCGTGGCTGGGATTTGGATCGGCTGTGGAGAATGAGATTATGGAATGTCACAAAAGAAGAGACGCTTTCATGCAGAGTTTGATTGACCAGCAAAGGAAAAGAATGGTTGTTGAAACTAAAACTGGAGATTCGTTTCGCGATGGAAGGAAGAAGACGATGATTGAAGTACTGTTAGAGCTACAAGAATCTCAACCTGAGCAGTACAATGACGAAACTATCAAAGCCTTGATGCTGGTTCTGTTGGCAGCAGGTACGGAAACATCAGTGAACACGATGGAATGGGCCCTATCTCTTATGTTGAACCAACCAGAAGTTTTAAAGAAAGCGCAGGTCGAAATTGACGATCAAGTTGGGCAAGACCGTCTGATTGACGAATCTGACGTGGGAAACCTTCCCTACCTACGTGGCATCATCAACGAAACCTTACGAATGTACCCTCCAGGTCCACTGATGGTACCCCATGAGTCATCAAAAGAGTGTAGCGTTGGAGGATACGATATCCCACGTGGCACTATGCTGTACGTGAATTTATGGGCGATTCATAACGACCCGAAGAATTGGGGTGAGCCGAGAAAGTTTGATCCGGAGAGGTTTGAGAGGGTGGAAAGTGACAAGTATGGGTTCAATCTGATGCCGTTCGGGGCGGGTAGAAGGGGCTGTCCAGGAGAGGGATTGGGGCTTCGCGTGATTGGGCTTGTAATGGGCTCACTGATCCAGTGCTTTGAATGGGAGCGTCCTGGCGACGAGTTGGTGGATATGACAGAAGGCATTGCAGTCTCTATGCCCAAGGCCCAACGCTTGCTCGCTAAATGTAGACCTCGACCCATAGTTCGACATCTTCATCTTTCTCAAACCAGTCCATATTCTGTTAGTAACTTAACATAG | 1566 | 48.85 | MGVLGAIFLYIPLFLVLYTLTEQFLHKIRNLPPTPFPSLPVIGHLHLLNKPLYRTLAKISNRYGPVVFLRFGSRQVLVVSSPSAAEECLTKNDVVFANRPRLLLSKWFGYNNTNLVWSSYGDHWRNLRRISTVEVLSTHRLQMLSTVRLEEVKSLIRRLARSETQVHNMKNAFFDLTYNIMLRMIVGKRFYGDDVDDADEARRYRELQAESTRLSGKSNIGDFIPLMSWLGFGSAVENEIMECHKRRDAFMQSLIDQQRKRMVVETKTGDSFRDGRKKTMIEVLLELQESQPEQYNDETIKALMLVLLAAGTETSVNTMEWALSLMLNQPEVLKKAQVEIDDQVGQDRLIDESDVGNLPYLRGIINETLRMYPPGPLMVPHESSKECSVGGYDIPRGTMLYVNLWAIHNDPKNWGEPRKFDPERFERVESDKYGFNLMPFGAGRRGCPGEGLGLRVIGLVMGSLIQCFEWERPGDELVDMTEGIAVSMPKAQRLLAKCRPRPIVRHLHLSQTSPYSVSNLT | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 2766827 | 2770218 | + | Lag0037009.1 | Lac2g0371 | 597635 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g0371 | 521 | CDD | CYP81 | 64 | 494 | - | - | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g0371 | 521 | Pfam | Cytochrome P450 | 33 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | SUPERFAMILY | Cytochrome P450 | 32 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | FunFam | Cytochrome P450 family protein | 24 | 504 | - | - | |
| Lac2g0371 | 521 | Gene3D | Cytochrome P450 | 26 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g0371 | 521 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 501 | IPR050651 | - | |
| Lac2g0371 | 521 | Coils | Coil | 152 | 172 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g0371 | Lac-Chr2:2766827 | Lac2g0888 | Lac-Chr2:6995338 | 4.90E-160 | dispersed | |
| Lac2g0370 | Lac-Chr2:2762378 | Lac2g0371 | Lac-Chr2:2766827 | 1.40E-179 | tandem |
Pathway information