Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0382 ATGAGTTGCAACGGTTGCAGAGTTCTCCGGAAGGGCTGCAGCGAAGGTTGCGTTTTAAGGTCAAGTCTCCACTGGATTGACTCACCCGAAGCCCAAGGCAACGCCACCTTATTTCTCGCCAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTCCCCCATCATCAAAGACCCGCTTGCGGCCGCACGGTCAACCCCGTCAGCGGCGCCGTGGGGTTGTTGTCCAGCGGAAACTGGCATATCTGTCAGGCGGCGGCCGAGACGGTTCTCAGCGGAGGAGTTCTCCGGCCGATACCCGGAATCGAGCTTTCTGGGAATCCCACGCCCAACGTCGATGAATCCTCCCTCACTTTCAATACGGATGTTTGGACCACCACCACACGGAATCTCCAATTTTACCCATCCATTCCGTCCGACTTCCGGCTCTCCGATCTCGGCCTCGCCACTGGCAGAGGAAAGAATCATCCGTTGGAGAACCGGCGCTCTCTCGATTCAGAGGACTCGGTGATGACCAGCTTTGGAAGCGGCGATCACGGCGACGGCTACCGGCGGAAAGAGACGAAGCTTTTGAACTTATTCATCTGA 594 56.9 MSCNGCRVLRKGCSEGCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPHHQRPACGRTVNPVSGAVGLLSSGNWHICQAAAETVLSGGVLRPIPGIELSGNPTPNVDESSLTFNTDVWTTTTRNLQFYPSIPSDFRLSDLGLATGRGKNHPLENRRSLDSEDSVMTSFGSGDHGDGYRRKETKLLNLFI 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2820811 2821527 - Lag0037020.1 Lac2g0382 597646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0382 197 MobiDBLite consensus disorder prediction 154 182 - -
Lac2g0382 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 113 - GO:0010468(PANTHER)
Lac2g0382 197 ProSiteProfiles LOB domain profile. 1 98 IPR004883 -
Lac2g0382 197 Pfam Lateral organ boundaries (LOB) domain 2 92 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0382 Lac-Chr2:2820811 Lac3g0479 Lac-Chr3:3652801 2.80E-31 dispersed
Lac1g2647 Lac-Chr1:47799439 Lac2g0382 Lac-Chr2:2820811 5.10E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23440 PF03195 LOB 3.40E-15 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0382 - - - 0.0