Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0403 ATGGCCACAATATCTGTTTGGTTGGTGGCTGTTCTTCTGGCGTTCTCCGCCGTAGCGGCCGCCGCAGGGTCTCAGTGGACGGTGAAGTCGCTGCCGGGATTCCCAGGTCGTCTTCCTTTCGAACTGGAAACAGGATACGTGGGAGTGGGAAACTCAGAGGAATTTCAGCTCTTTTATTATTTTATCAAATCCGAAGCAAATCCCCAAACTGATCCTCTCATTTTGTGGCTCACCGGAGGCCCTGGCTGCTCTGCAATCTCTGGACTTGCCTTTGAAATTGGTCCAATAAGTTTGGAAGGAAAGCTGAGTAATGGAAGTCTGCCTCAACTAATCTTGAACCCTTACTCATGGACAAAGAAATCTAGTATAATATTTGTAGACTTACCGGTGGGCACTGGATTTTCGTATTCAAGAACTTCAAAAATTCCTAAACCAGGAGATTCTTATCAAATTCATCATGCTCTTCAATTCTTGAGAAAGTGGTTGGGTGATCATCCAGAATTTATATCAAACCCATTCTATATTGGTGGAGACTCATACTCTGGTATGATCGTTCCAGTTGTTGCTCACGAAATTTTGGAAGGAAATGAACATATTTTTCCATTTGTAAATTTCCAGGGATACATATTGGGAAATCCTTTCACTACTCCTCATTCAGATACAAATGCACAAATCCCTTTTGCTCATAATATGGGTCTCATCTCTGATGAATTGTTTGAGCCGTTGAAAACTAGTTGTCAAGGAGAATATGTCAACATTGATCCAAATAATGTGGAGTGCTTAAGACATTATGATACATTTAAAAAGTGTACTTCAAAAATTCGGATAGGATGTATTTTATGGCCCAATTGTTCGTCTTTAAAACCACCTGATATATCTGGTCGTAGATCTCTCTTCAGCATCCCTGATAATCATCATAGATGTCCGGTACATAATTTCTTCTCCTTATCAATAAAATATTATGACTACTTACTTTCTTATTATTGGGCTAACCATGACCAAGTCCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATAAGATGTAAGGACAACAATTACTACAATTATGAACTTATCAGTGTTGTTCCTTATCACGTGATTCTTAGTTCTAAAGGATATCGGTCTTTAATCTATAGTGGAGATCATGATTTGGTAGTGCCACATATAGAAACTCAAGCATGGATCAAATCTTTAAACTATTCCATTGTTGATGACTGGAGGCCATGGTTCATCGAGGATGAAGTAGCAGGATACACGAGAAGCTTTGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACACGAAAAGAATGTAGCATACTATTTAGTAGATGGATAGCAGGAGAATCCATATAA 1389 39.31 MATISVWLVAVLLAFSAVAAAAGSQWTVKSLPGFPGRLPFELETGYVGVGNSEEFQLFYYFIKSEANPQTDPLILWLTGGPGCSAISGLAFEIGPISLEGKLSNGSLPQLILNPYSWTKKSSIIFVDLPVGTGFSYSRTSKIPKPGDSYQIHHALQFLRKWLGDHPEFISNPFYIGGDSYSGMIVPVVAHEILEGNEHIFPFVNFQGYILGNPFTTPHSDTNAQIPFAHNMGLISDELFEPLKTSCQGEYVNIDPNNVECLRHYDTFKKCTSKIRIGCILWPNCSSLKPPDISGRRSLFSIPDNHHRCPVHNFFSLSIKYYDYLLSYYWANHDQVRKALHIHEGSIGEWIRCKDNNYYNYELISVVPYHVILSSKGYRSLIYSGDHDLVVPHIETQAWIKSLNYSIVDDWRPWFIEDEVAGYTRSFANKMTFATIKGGGHTAEYTRKECSILFSRWIAGESI 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2951377 2954512 - Lag0037041.1 Lac2g0403 597667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0403 462 Gene3D alpha/beta hydrolase 31 462 IPR029058 -
Lac2g0403 462 FunFam Serine carboxypeptidase-like 11 22 462 - -
Lac2g0403 462 Pfam Serine carboxypeptidase 32 459 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0403 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0403 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0403 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0403 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0403 462 FunFam Carboxypeptidase 317 461 - -
Lac2g0403 462 SUPERFAMILY alpha/beta-Hydrolases 27 459 IPR029058 -
Lac2g0403 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 456 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0403 Lac-Chr2:2951377 Lac2g0408 Lac-Chr2:2985560 1.00E-180 dispersed
Lac2g0403 Lac-Chr2:2951377 Lac2g0404 Lac-Chr2:2964353 3.20E-78 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0403 K16296 - csv:101210918 667.151