Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0403 | ATGGCCACAATATCTGTTTGGTTGGTGGCTGTTCTTCTGGCGTTCTCCGCCGTAGCGGCCGCCGCAGGGTCTCAGTGGACGGTGAAGTCGCTGCCGGGATTCCCAGGTCGTCTTCCTTTCGAACTGGAAACAGGATACGTGGGAGTGGGAAACTCAGAGGAATTTCAGCTCTTTTATTATTTTATCAAATCCGAAGCAAATCCCCAAACTGATCCTCTCATTTTGTGGCTCACCGGAGGCCCTGGCTGCTCTGCAATCTCTGGACTTGCCTTTGAAATTGGTCCAATAAGTTTGGAAGGAAAGCTGAGTAATGGAAGTCTGCCTCAACTAATCTTGAACCCTTACTCATGGACAAAGAAATCTAGTATAATATTTGTAGACTTACCGGTGGGCACTGGATTTTCGTATTCAAGAACTTCAAAAATTCCTAAACCAGGAGATTCTTATCAAATTCATCATGCTCTTCAATTCTTGAGAAAGTGGTTGGGTGATCATCCAGAATTTATATCAAACCCATTCTATATTGGTGGAGACTCATACTCTGGTATGATCGTTCCAGTTGTTGCTCACGAAATTTTGGAAGGAAATGAACATATTTTTCCATTTGTAAATTTCCAGGGATACATATTGGGAAATCCTTTCACTACTCCTCATTCAGATACAAATGCACAAATCCCTTTTGCTCATAATATGGGTCTCATCTCTGATGAATTGTTTGAGCCGTTGAAAACTAGTTGTCAAGGAGAATATGTCAACATTGATCCAAATAATGTGGAGTGCTTAAGACATTATGATACATTTAAAAAGTGTACTTCAAAAATTCGGATAGGATGTATTTTATGGCCCAATTGTTCGTCTTTAAAACCACCTGATATATCTGGTCGTAGATCTCTCTTCAGCATCCCTGATAATCATCATAGATGTCCGGTACATAATTTCTTCTCCTTATCAATAAAATATTATGACTACTTACTTTCTTATTATTGGGCTAACCATGACCAAGTCCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATAAGATGTAAGGACAACAATTACTACAATTATGAACTTATCAGTGTTGTTCCTTATCACGTGATTCTTAGTTCTAAAGGATATCGGTCTTTAATCTATAGTGGAGATCATGATTTGGTAGTGCCACATATAGAAACTCAAGCATGGATCAAATCTTTAAACTATTCCATTGTTGATGACTGGAGGCCATGGTTCATCGAGGATGAAGTAGCAGGATACACGAGAAGCTTTGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACACGAAAAGAATGTAGCATACTATTTAGTAGATGGATAGCAGGAGAATCCATATAA | 1389 | 39.31 | MATISVWLVAVLLAFSAVAAAAGSQWTVKSLPGFPGRLPFELETGYVGVGNSEEFQLFYYFIKSEANPQTDPLILWLTGGPGCSAISGLAFEIGPISLEGKLSNGSLPQLILNPYSWTKKSSIIFVDLPVGTGFSYSRTSKIPKPGDSYQIHHALQFLRKWLGDHPEFISNPFYIGGDSYSGMIVPVVAHEILEGNEHIFPFVNFQGYILGNPFTTPHSDTNAQIPFAHNMGLISDELFEPLKTSCQGEYVNIDPNNVECLRHYDTFKKCTSKIRIGCILWPNCSSLKPPDISGRRSLFSIPDNHHRCPVHNFFSLSIKYYDYLLSYYWANHDQVRKALHIHEGSIGEWIRCKDNNYYNYELISVVPYHVILSSKGYRSLIYSGDHDLVVPHIETQAWIKSLNYSIVDDWRPWFIEDEVAGYTRSFANKMTFATIKGGGHTAEYTRKECSILFSRWIAGESI | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2951377 | 2954512 | - | Lag0037041.1 | Lac2g0403 | 597667 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0403 | 462 | Gene3D | alpha/beta hydrolase | 31 | 462 | IPR029058 | - | |
Lac2g0403 | 462 | FunFam | Serine carboxypeptidase-like 11 | 22 | 462 | - | - | |
Lac2g0403 | 462 | Pfam | Serine carboxypeptidase | 32 | 459 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0403 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 113 | 125 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0403 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 430 | 443 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0403 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 161 | 186 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0403 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 126 | 136 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0403 | 462 | FunFam | Carboxypeptidase | 317 | 461 | - | - | |
Lac2g0403 | 462 | SUPERFAMILY | alpha/beta-Hydrolases | 27 | 459 | IPR029058 | - | |
Lac2g0403 | 462 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 25 | 456 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0403 | Lac-Chr2:2951377 | Lac2g0408 | Lac-Chr2:2985560 | 1.00E-180 | dispersed | |
Lac2g0403 | Lac-Chr2:2951377 | Lac2g0404 | Lac-Chr2:2964353 | 3.20E-78 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0403 | K16296 | - | csv:101210918 | 667.151 |