Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0404 | ATGGGCCTTGTCTCTAAGGAATTGTTTGAGTTGTTGAAAACTAGTTGCAAAGGGGAATATGTGAACATTGATCCAAATAATGTGGAATGCTTAAGACATTATGATACATTTGAAAAGGAGTATGACTACTTACTTTCTTATTATTGGGCTAACCATGACCAAGTCCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATAAGATGTAAAGGCAAGGATTACTACAATTATGAACTTATTAGTGTTGTTCCTTATCACACGATTCTTAGTTCTAAAGGATATCGGTCTTTAATCTATAGTGGAGATCATGATTTGGTAGTGCCACATATAGAAACTCAAGCATGGATCAAATCTTTAAACTATTCCATTGTTGATGACTGGAGGCCATGGTTCATCGAGGACGAAGTAGCAGGATACACGAGAAGCTTTGCAAATAAGATGACATTTGCAACTATAAAAATGATTATAACGTTGGTAGATGATTTCTCAAGATACACATGGCTTTTCATGATGCGACACAAATCCGATGCCTTAAAGATAGTTCCTCAGTTTTTTCGTCTGGTAGAAACTCAATATAATGCTGTCATTAAAACCTTTCGGTCTGATAATGCTCCAGAACTGTCTTTCAAGGATTTTTTTGCTTCCAAAGGTGTCGTTCATCAGTTTTCTTGTGTTGGACGGCCCGAACAAAATGCCGTAGTTGAAAGAAAACATCAGCACTTGCTTAATGTTGCTCGTGCTTTGATGTATCAGTCAAGAATTCCAATCCAGTTTTGGGGGGATTGTGTCTTAACCGCAGCTTTTCTCATCAATAGAACTCCGACTCCTTTACTTGACTGGCAGACACCCTATTTCAAGCTTAATAATGAGCAGGTTGATTATACTTCCATCCGGACTTTTGGCTCCTGA | 918 | 38.13 | MGLVSKELFELLKTSCKGEYVNIDPNNVECLRHYDTFEKEYDYLLSYYWANHDQVRKALHIHEGSIGEWIRCKGKDYYNYELISVVPYHTILSSKGYRSLIYSGDHDLVVPHIETQAWIKSLNYSIVDDWRPWFIEDEVAGYTRSFANKMTFATIKMIITLVDDFSRYTWLFMMRHKSDALKIVPQFFRLVETQYNAVIKTFRSDNAPELSFKDFFASKGVVHQFSCVGRPEQNAVVERKHQHLLNVARALMYQSRIPIQFWGDCVLTAAFLINRTPTPLLDWQTPYFKLNNEQVDYTSIRTFGS | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2964353 | 2967293 | - | Lag0037042.1 | Lac2g0404 | 597668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0404 | 305 | Pfam | Serine carboxypeptidase | 42 | 156 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0404 | 305 | PANTHER | TRANSPOSASE, PUTATIVE-RELATED | 156 | 305 | - | - | |
Lac2g0404 | 305 | SUPERFAMILY | alpha/beta-Hydrolases | 1 | 156 | IPR029058 | - | |
Lac2g0404 | 305 | Pfam | Integrase core domain | 158 | 231 | IPR001584 | GO:0015074(InterPro) | |
Lac2g0404 | 305 | SUPERFAMILY | Ribonuclease H-like | 156 | 288 | IPR012337 | - | |
Lac2g0404 | 305 | Gene3D | alpha/beta hydrolase | 5 | 157 | IPR029058 | - | |
Lac2g0404 | 305 | ProSiteProfiles | Integrase catalytic domain profile. | 128 | 294 | IPR001584 | GO:0015074(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0404 | Lac-Chr2:2964353 | Lac2g0408 | Lac-Chr2:2985560 | 6.00E-65 | dispersed | |
Lac2g0403 | Lac-Chr2:2951377 | Lac2g0404 | Lac-Chr2:2964353 | 3.20E-78 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0404 | K16296 | - | csv:101207623 | 262.692 |