Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0404 ATGGGCCTTGTCTCTAAGGAATTGTTTGAGTTGTTGAAAACTAGTTGCAAAGGGGAATATGTGAACATTGATCCAAATAATGTGGAATGCTTAAGACATTATGATACATTTGAAAAGGAGTATGACTACTTACTTTCTTATTATTGGGCTAACCATGACCAAGTCCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATAAGATGTAAAGGCAAGGATTACTACAATTATGAACTTATTAGTGTTGTTCCTTATCACACGATTCTTAGTTCTAAAGGATATCGGTCTTTAATCTATAGTGGAGATCATGATTTGGTAGTGCCACATATAGAAACTCAAGCATGGATCAAATCTTTAAACTATTCCATTGTTGATGACTGGAGGCCATGGTTCATCGAGGACGAAGTAGCAGGATACACGAGAAGCTTTGCAAATAAGATGACATTTGCAACTATAAAAATGATTATAACGTTGGTAGATGATTTCTCAAGATACACATGGCTTTTCATGATGCGACACAAATCCGATGCCTTAAAGATAGTTCCTCAGTTTTTTCGTCTGGTAGAAACTCAATATAATGCTGTCATTAAAACCTTTCGGTCTGATAATGCTCCAGAACTGTCTTTCAAGGATTTTTTTGCTTCCAAAGGTGTCGTTCATCAGTTTTCTTGTGTTGGACGGCCCGAACAAAATGCCGTAGTTGAAAGAAAACATCAGCACTTGCTTAATGTTGCTCGTGCTTTGATGTATCAGTCAAGAATTCCAATCCAGTTTTGGGGGGATTGTGTCTTAACCGCAGCTTTTCTCATCAATAGAACTCCGACTCCTTTACTTGACTGGCAGACACCCTATTTCAAGCTTAATAATGAGCAGGTTGATTATACTTCCATCCGGACTTTTGGCTCCTGA 918 38.13 MGLVSKELFELLKTSCKGEYVNIDPNNVECLRHYDTFEKEYDYLLSYYWANHDQVRKALHIHEGSIGEWIRCKGKDYYNYELISVVPYHTILSSKGYRSLIYSGDHDLVVPHIETQAWIKSLNYSIVDDWRPWFIEDEVAGYTRSFANKMTFATIKMIITLVDDFSRYTWLFMMRHKSDALKIVPQFFRLVETQYNAVIKTFRSDNAPELSFKDFFASKGVVHQFSCVGRPEQNAVVERKHQHLLNVARALMYQSRIPIQFWGDCVLTAAFLINRTPTPLLDWQTPYFKLNNEQVDYTSIRTFGS 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2964353 2967293 - Lag0037042.1 Lac2g0404 597668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0404 305 Pfam Serine carboxypeptidase 42 156 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0404 305 PANTHER TRANSPOSASE, PUTATIVE-RELATED 156 305 - -
Lac2g0404 305 SUPERFAMILY alpha/beta-Hydrolases 1 156 IPR029058 -
Lac2g0404 305 Pfam Integrase core domain 158 231 IPR001584 GO:0015074(InterPro)
Lac2g0404 305 SUPERFAMILY Ribonuclease H-like 156 288 IPR012337 -
Lac2g0404 305 Gene3D alpha/beta hydrolase 5 157 IPR029058 -
Lac2g0404 305 ProSiteProfiles Integrase catalytic domain profile. 128 294 IPR001584 GO:0015074(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0404 Lac-Chr2:2964353 Lac2g0408 Lac-Chr2:2985560 6.00E-65 dispersed
Lac2g0403 Lac-Chr2:2951377 Lac2g0404 Lac-Chr2:2964353 3.20E-78 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0404 K16296 - csv:101207623 262.692