Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac2g0411 | ATGGCCACTCCCATTTTCAGGTCCTCTGTTTCGTTAATTCTCGTTTTTCAGTTGCTCTCCGCCGCCGCCGCCGCCGCCGACTCATTCTGGAATGTCAAGTATCTACCGGGATTTTCAGGTCCTCTTCCATTCGAACTCGAAACTGGATATGTCGGCGTTGGAGATTCCGATGAAGTTCAGCTGTTTTATTACTTCGTCAAATCTCAAACAAATCCCCAGACAGATCCTCTACTGGCATGGTACAACGGCGGCCCCGGTTGTTCTGGTCTCTGTGGAATTCTCTTTGAAATCGGACCTCTAATTTTCAAGTCAGAACCCTACAATGGAAGTTTACCTCAACTAATGTTGAATCCTCATACATGGACCAAGAAAGCCAATATACTATTTGTTGATACGCCTGTCGGCACTGGATTTTCATATAATCGAACTCTACATGGTTCTAAAAAAGGGACTTCACTACAAGTTGAACAAAATCATCAATTCTTGAGAAAGTGGCTGGCTAATCATCCAGAATTTATATCTAATCCATTTTATGTTAGTGGAGACTCATTTGCTGGTATGGTCATTCCACCCCTTACTCAAGCAATCTCAGAAGGAAATAACCTTGCTTTCCCAATTATAAACCTTCAGGGATACATCGGGGGAGATCCTGTCACTATAATTGCAACATTTAAAAATTTTAGGATTCCATTTGCTCATAGCAAGAACCTCATCTCCGACGAATTGTATGAGTCATTGACAACTAATTGTAAAGGAGAATATGAGGACGTTGACCCAGAGAATTTGGAGTGCATAAAACATGTGAAAACGTTCAAAAAGCTTGTAAGCAGAATCTGCATTTGTTGTATTACGTGGGCTTTCTGTAACGACGTTTCTGGAGCACCAGAATATACATTTGGTGTGCAGAGATCTCTCTACAGCACCTCCCAAGTGCTTCTTGCTCCCAGAGTGTTACCTCCTCCTTCTCTTGATTGTCAAGAGTATAAATACTACCTTGGTTATTACTGGGCTAACGATGATCGAGTTCAGAAAGCACTTCATATACGTGAGGGAACTATTGGAGAATGGGTAAGATGTCAGGGTCAAAAAGATTACAATTACGATATTCCGAATGTTGTTCCTTATCATGCAAATCTAAGTTCTAAAGGTTATCGGTCTTTGATTTTTAGTGGGGATCTTGATATGTTGGTGCCAATTTTGGACACTGAAGCATGGATTAAATCTCTAAATTATTCCATTGTGGATGACTGGAGGCCTTGGTTTGACATGGATGATCAAGTACTCGGATACACAAGAACCTATGCAAATAACATGACATTTGCAACAATAAAAGGTGGAGGGCACACACCAGAATACATGCCATACCAAAGCCTCCTAATGTTTAATAGATGGATAGCAGGAGAACCTTTATAA | 1413 | 40.98 | MATPIFRSSVSLILVFQLLSAAAAAADSFWNVKYLPGFSGPLPFELETGYVGVGDSDEVQLFYYFVKSQTNPQTDPLLAWYNGGPGCSGLCGILFEIGPLIFKSEPYNGSLPQLMLNPHTWTKKANILFVDTPVGTGFSYNRTLHGSKKGTSLQVEQNHQFLRKWLANHPEFISNPFYVSGDSFAGMVIPPLTQAISEGNNLAFPIINLQGYIGGDPVTIIATFKNFRIPFAHSKNLISDELYESLTTNCKGEYEDVDPENLECIKHVKTFKKLVSRICICCITWAFCNDVSGAPEYTFGVQRSLYSTSQVLLAPRVLPPPSLDCQEYKYYLGYYWANDDRVQKALHIREGTIGEWVRCQGQKDYNYDIPNVVPYHANLSSKGYRSLIFSGDLDMLVPILDTEAWIKSLNYSIVDDWRPWFDMDDQVLGYTRTYANNMTFATIKGGGHTPEYMPYQSLLMFNRWIAGEPL | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3013391 | 3016356 | - | Lag0037049.1 | Lac2g0411 | 597675 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac2g0411 | 470 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 130 | 140 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0411 | 470 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 438 | 451 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0411 | 470 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 165 | 190 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0411 | 470 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 117 | 129 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0411 | 470 | Gene3D | - | 324 | 470 | - | - | |
Lac2g0411 | 470 | FunFam | Carboxypeptidase | 324 | 469 | - | - | |
Lac2g0411 | 470 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 31 | 464 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER) | |
Lac2g0411 | 470 | Pfam | Serine carboxypeptidase | 36 | 467 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Lac2g0411 | 470 | Gene3D | alpha/beta hydrolase | 27 | 296 | IPR029058 | - | |
Lac2g0411 | 470 | SUPERFAMILY | alpha/beta-Hydrolases | 32 | 469 | IPR029058 | - | |
Lac2g0411 | 470 | FunFam | Serine carboxypeptidase-like 19 | 25 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0411 | Lac-Chr2:3013391 | Lac4g1689 | Lac-Chr4:35670136 | 2.10E-149 | dispersed | |
Lac2g0410 | Lac-Chr2:3000455 | Lac2g0411 | Lac-Chr2:3013391 | 5.10E-156 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac2g0411 | K16296 | - | csv:101210918 | 530.406 |