Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0411 ATGGCCACTCCCATTTTCAGGTCCTCTGTTTCGTTAATTCTCGTTTTTCAGTTGCTCTCCGCCGCCGCCGCCGCCGCCGACTCATTCTGGAATGTCAAGTATCTACCGGGATTTTCAGGTCCTCTTCCATTCGAACTCGAAACTGGATATGTCGGCGTTGGAGATTCCGATGAAGTTCAGCTGTTTTATTACTTCGTCAAATCTCAAACAAATCCCCAGACAGATCCTCTACTGGCATGGTACAACGGCGGCCCCGGTTGTTCTGGTCTCTGTGGAATTCTCTTTGAAATCGGACCTCTAATTTTCAAGTCAGAACCCTACAATGGAAGTTTACCTCAACTAATGTTGAATCCTCATACATGGACCAAGAAAGCCAATATACTATTTGTTGATACGCCTGTCGGCACTGGATTTTCATATAATCGAACTCTACATGGTTCTAAAAAAGGGACTTCACTACAAGTTGAACAAAATCATCAATTCTTGAGAAAGTGGCTGGCTAATCATCCAGAATTTATATCTAATCCATTTTATGTTAGTGGAGACTCATTTGCTGGTATGGTCATTCCACCCCTTACTCAAGCAATCTCAGAAGGAAATAACCTTGCTTTCCCAATTATAAACCTTCAGGGATACATCGGGGGAGATCCTGTCACTATAATTGCAACATTTAAAAATTTTAGGATTCCATTTGCTCATAGCAAGAACCTCATCTCCGACGAATTGTATGAGTCATTGACAACTAATTGTAAAGGAGAATATGAGGACGTTGACCCAGAGAATTTGGAGTGCATAAAACATGTGAAAACGTTCAAAAAGCTTGTAAGCAGAATCTGCATTTGTTGTATTACGTGGGCTTTCTGTAACGACGTTTCTGGAGCACCAGAATATACATTTGGTGTGCAGAGATCTCTCTACAGCACCTCCCAAGTGCTTCTTGCTCCCAGAGTGTTACCTCCTCCTTCTCTTGATTGTCAAGAGTATAAATACTACCTTGGTTATTACTGGGCTAACGATGATCGAGTTCAGAAAGCACTTCATATACGTGAGGGAACTATTGGAGAATGGGTAAGATGTCAGGGTCAAAAAGATTACAATTACGATATTCCGAATGTTGTTCCTTATCATGCAAATCTAAGTTCTAAAGGTTATCGGTCTTTGATTTTTAGTGGGGATCTTGATATGTTGGTGCCAATTTTGGACACTGAAGCATGGATTAAATCTCTAAATTATTCCATTGTGGATGACTGGAGGCCTTGGTTTGACATGGATGATCAAGTACTCGGATACACAAGAACCTATGCAAATAACATGACATTTGCAACAATAAAAGGTGGAGGGCACACACCAGAATACATGCCATACCAAAGCCTCCTAATGTTTAATAGATGGATAGCAGGAGAACCTTTATAA 1413 40.98 MATPIFRSSVSLILVFQLLSAAAAAADSFWNVKYLPGFSGPLPFELETGYVGVGDSDEVQLFYYFVKSQTNPQTDPLLAWYNGGPGCSGLCGILFEIGPLIFKSEPYNGSLPQLMLNPHTWTKKANILFVDTPVGTGFSYNRTLHGSKKGTSLQVEQNHQFLRKWLANHPEFISNPFYVSGDSFAGMVIPPLTQAISEGNNLAFPIINLQGYIGGDPVTIIATFKNFRIPFAHSKNLISDELYESLTTNCKGEYEDVDPENLECIKHVKTFKKLVSRICICCITWAFCNDVSGAPEYTFGVQRSLYSTSQVLLAPRVLPPPSLDCQEYKYYLGYYWANDDRVQKALHIREGTIGEWVRCQGQKDYNYDIPNVVPYHANLSSKGYRSLIFSGDLDMLVPILDTEAWIKSLNYSIVDDWRPWFDMDDQVLGYTRTYANNMTFATIKGGGHTPEYMPYQSLLMFNRWIAGEPL 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3013391 3016356 - Lag0037049.1 Lac2g0411 597675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0411 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0411 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0411 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0411 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0411 470 Gene3D - 324 470 - -
Lac2g0411 470 FunFam Carboxypeptidase 324 469 - -
Lac2g0411 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 464 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Lac2g0411 470 Pfam Serine carboxypeptidase 36 467 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac2g0411 470 Gene3D alpha/beta hydrolase 27 296 IPR029058 -
Lac2g0411 470 SUPERFAMILY alpha/beta-Hydrolases 32 469 IPR029058 -
Lac2g0411 470 FunFam Serine carboxypeptidase-like 19 25 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0411 Lac-Chr2:3013391 Lac4g1689 Lac-Chr4:35670136 2.10E-149 dispersed
Lac2g0410 Lac-Chr2:3000455 Lac2g0411 Lac-Chr2:3013391 5.10E-156 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0411 K16296 - csv:101210918 530.406