Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0428 ATGGCGCCCTCGTTTGATTGGTGGGGAAAAGACACTCACAGAGGAACTCCTGTTGTTGTCAAGATGGAGAATCCGAATTGGTCGATGGTTGAGCTCGAGGGTCCGTCGGAGGATGATTTTCTCATCGCCGGCGAGTCGCCGTCGGGTCGGACCAGAGAGAAAGGCCGAGGCAAAAACGCTAAGCAACTCACGTGGGTTCTCCTCCTCAAGGCTCACAAGGCCGCCGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACTTGGCCGCCGCCGTCAGACGCCGTGTTGCTTCTGGCCGGACTGACGCCGACGACGCCGACAATGACGTCCCTGTCGGAGGCAGAGAGAAAGAGAACCCCACTGTGAAAACGAGGTTCTATTCTTGTATCAAAGTGTTTCTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGGTTGCGGCCTTCTTCAAAGGCTGGCATTTCGGTACTCCAAAGCTTCAATTGGATTATCTCTGGGCATCGCAGTGGGGTTTTAAAGGAGTTTTTGATTGGATTTACTCTCAGTGGGTATTGATTCGAGTGGACTATTTAGCTCCTCCTCTTCAGTTCTTAACCAATGCCTGTATCATTCTGTTTCTCATTCAGAGCTTGGATCGTTTAGTCTTGTGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATCAAACCGGTTCTTAAACCTGGAGACGAAGACCTTGAATCTGGCGAGAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAACGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAACTTGGACTGGCCAAGAACCAAGCTGCTAATTCAAGTTCTTGATGATTCTGATGATCCAACTACACAGTTGCTGATTAAAGAGGAGGTTCATAAATGGCAGCAAGAGGGTGCCAACATTGTTTATCGTCATAGGGTCATTAGAGATGGTTATAAGGCTGGCAATCTCAAATCGGCCATGAATTGTAGCTATGTTAAAGATTACGAATTCGTCGCCATCTTCGACGCTGATTTTCAACCCACACCTGATTTCCTTAAAAAAACTGTTCCTCATTTCAAGGACAATGAAGAGTTGGGACTGGTTCAAGCAAGGTGGTCTTTTGTGAACAGGGACGAGAATTTACTAACCAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTGAACAGTATCTTCCTCAACTTCTTTGGATTCAATGGTACTGCTGGTGTGTGGAGGATCAAAGCTCTGGAGGACGCCGGTGGGTGGATGGAAAGGACCACCGTCGAGGACATGGATATTGCGGTCCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTAAATGATGTTGAGTGCCAATGTGAGCTACCAGAATCTTATGAAGCTTACAGAAAACAACAACATAGATGGCATTCTGGACCAATGCAATTGTTTCGCCTTTGTCTGCCTGCTATTATTCGATCAAAGATTAGTGTATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCTTTCACACTTTTCTGCATAATTCTCCCAATGACAATGTTCGTTCCCGAAGCCGAGCTACCCGCTTGGGTCGTTTGCTATATCCCGGCTACCATGTCGTTTCTAAACATCCTGCCGGCCCCAAAAGCCTTCCCTTTCATTGTCCCTTACCTCCTCTTCGAGAACACTATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTTGGTAGTGCCTATGAATGGGTTGTTACAAAGAAATCCGGTCGTTCCTCCGAGGGCGATCTCGTCTCCTTGGTAGAGAGAGAGCAAAAGCATCAAAGAGGGGCTTCGGCGCCCGACCTCGAAGAGATGAAGGAAGAAATTCAGAAGCAAGAACAGAAAGCTTCTTTGCGAAAGAAGCACAACCGAATATACACGAAAGAGCTCGCATTGGCTTTCCTCCTCCTAACGGCATCGGCACGGAGCCTTCTGTCTGCACAAGGGATCCATTTCTACTTCTTGCTGTTCCAGGGGATCTCGTTCCTGCTGGTCGGTTTGGACTTGATCGGTGAACAGATAGGTTGA 2121 47.1 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGESPSGRTREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLAAAVRRRVASGRTDADDADNDVPVGGREKENPTVKTRFYSCIKVFLWLSVLLLGFEVAAFFKGWHFGTPKLQLDYLWASQWGFKGVFDWIYSQWVLIRVDYLAPPLQFLTNACIILFLIQSLDRLVLCLGCFWIRFKKIKPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNSIFLNFFGFNGTAGVWRIKALEDAGGWMERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGASAPDLEEMKEEIQKQEQKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3122723 3125230 - Lag0037066.1 Lac2g0428 597692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0428 706 Coils Coil 633 653 - -
Lac2g0428 706 FunFam probable xyloglucan glycosyltransferase 5 240 465 - -
Lac2g0428 706 Pfam Glycosyl transferase family group 2 341 547 IPR001173 -
Lac2g0428 706 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 176 704 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Lac2g0428 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 239 464 IPR029044 -
Lac2g0428 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 526 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0428 Lac-Chr2:3122723 Lac9g2668 Lac-Chr9:45034125 4.50E-116 dispersed
Lac2g0693 Lac-Chr2:5210373 Lac2g0428 Lac-Chr2:3122723 9.20E-263 transposed
Lac4g1933 Lac-Chr4:38781815 Lac2g0428 Lac-Chr2:3122723 1.20E-246 transposed
Lac8g2613 Lac-Chr8:43718309 Lac2g0428 Lac-Chr2:3122723 7.10E-244 transposed
Lac2g0428 Lac-Chr2:3122723 Lac6g0224 Lac-Chr6:1786030 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0428 - - - 0.0