Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0440 ATTCAACCACACCATTCAAGTCCCCCCTGGGACCCACTCGAAGACCACCACATCACCGGAATTTCCTCGCCGGTCTTCCTCGCCGGTGGGGTCGACTCCTTTATCGACTCATTTTCCGCCATTCATCCTTACCTTCCCTCGGCCGCGGATTCCGACGAACTCGACGCGGCGGTGGATGGGTTTTCCTGTGATCATTTCCGGATGTTCGAGTTCAAAATCCGGAGATGCGCGCGTGGGAGGTCGCACGATTGGACTGAATGTCCGTACGCACATCCCGGCGAGAAGGCTCGCCGGCGGGATCCGAGGAAGTATCATTACTCCGGCACGGCCTGTCCGGAGTTTAGGAAAGGGAATTGCAAGAAAGGGGATTCTTGTGACCTGGCTCATGGGATTTTCGAGTGTTGGCTCCATCCGGCTCGGTACCGGACTCAGCCCTGTAAGGACGGACTGGCCTGTCGCCGTCGTGTCTGTTTTTTCGCCCACACGCCGGAGCAGCTTCGGGTTCTGCCGCAGCAGAGCCCGAGAACGCCGGTTTCGGCCGATTCCGGTGATGGGTCTTCTCGAATTTCGCTCGCATTCGATTCCTATTTTGCCAAAAAGTCATTCGTGACCTCACCCACTTCAATTCTATCAACGCCGCCAGTATCTCCGCCGTCTGATTCGCCTCCCATGTCGCCGAATTGCCCCCAACTCGGCGGCGGGTCGTTTAATTCAATGAATGGGCTGGTTTTGTCTATGCGTACTCTTCAGATAGGGAAATCGAAAGCAACCCCTCAATGGGGGGTTCAATTGGGACAGAATTTGCGCTCTCCCTCCGGCTCTGGTTTGTACAGCTTAACGACGACTCCGACCACCGGAAATTACGAATTATGGGGAAAGAATTACGAGGAAGAACCGGCAATGGAAAGAGTGGAATCTGGGAGAAACCTGAGAGCTAAAATGTATGCGAAACTCGGCAAAGACAACTCTGTGGAGCAGATGGATTCGACATTGACACCCGATGTCGGATGGGTCTCGGAGCTATTGATGTGA 1032 54.65 IQPHHSSPPWDPLEDHHITGISSPVFLAGGVDSFIDSFSAIHPYLPSAADSDELDAAVDGFSCDHFRMFEFKIRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPEFRKGNCKKGDSCDLAHGIFECWLHPARYRTQPCKDGLACRRRVCFFAHTPEQLRVLPQQSPRTPVSADSGDGSSRISLAFDSYFAKKSFVTSPTSILSTPPVSPPSDSPPMSPNCPQLGGGSFNSMNGLVLSMRTLQIGKSKATPQWGVQLGQNLRSPSGSGLYSLTTTPTTGNYELWGKNYEEEPAMERVESGRNLRAKMYAKLGKDNSVEQMDSTLTPDVGWVSELLM 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3241725 3242756 + Lag0037078.1 Lac2g0440 597704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0440 343 Gene3D - 102 174 - -
Lac2g0440 343 PANTHER UNKEMPT FAMILY MEMBER 34 342 IPR045234 -
Lac2g0440 343 SMART c3hfinal6 105 131 IPR000571 GO:0046872(InterPro)
Lac2g0440 343 SMART c3hfinal6 140 163 IPR000571 GO:0046872(InterPro)
Lac2g0440 343 MobiDBLite consensus disorder prediction 206 225 - -
Lac2g0440 343 ProSiteProfiles Zinc finger C3H1-type profile. 106 132 IPR000571 GO:0046872(InterPro)
Lac2g0440 343 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0742 Lac-Chr12:7759172 Lac2g0440 Lac-Chr2:3241725 2.60E-57 dispersed
Lac2g0440 Lac-Chr2:3241725 Lac6g3056 Lac-Chr6:48163544 8.40E-84 dispersed
Lac2g0440 Lac-Chr2:3241725 Lac3g0988 Lac-Chr3:8046319 2.10E-90 wgd
Lac2g0440 Lac-Chr2:3241725 Lac6g0213 Lac-Chr6:1667496 4.60E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23451 None None None None Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0440 - - - 0.0