Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g0444 ATGGGAATCTGTATATCCACTGCATCTTCTCAGATTCGCCATGAAACTGAAGGTGGAGAGCTCGTTTTCCAAGAAGATTATGGCTCTGTCTGTGGGATTCAGAAACTGGATTCCATTTGTTCCAAGCAAGGCAGCAAAGGGCTCAACCAAGATGCTGCCTTTTTCTATCAGGAGTATGGAGAGCCGGACACGGCTTTGTTTGGAGTATTTGATGGGCATGGGATGAATGGTCATATTGTGAGCAACATGGTGAAGAATAGGCTGCCTTGGCTGTTGCTTGGGCAGAGAAATGCTATGTCAAAAAATTTGGACGACGACAGAGATTTTCAAAATCACTTCGATGTTAGAGATGGGGAATTGGTGCAAAGTAAGAATTTTGTTTCGTGGAAAGAATCTGTGGTCACTGCCTTTAAGGTGATGGACAAGGAGATTAAACTTCAAGAGAATTTGGATTGCTCTAACAGCGGATCCACTGCTGTTATCGCTGTCAAACAGGGAGAAGATTTGGTGATTGCAAATTTGGGGGATTCGAGGGCAGTGATGGGAAGAATTACGGACGAGGGAATCAAGGCCATTCAATTAACGACTGATTTGAAGCCTGGTTTGCCAAATGAGGCTGAGCGAATAAGGAGGTGTAAAGGGAGAGTGTTGGCGTTGAAAGAAGAACCGCATATACAGAGAGTGTGGCTGCCGAATGAAGACTCGCCGGGGCTGGCCATGTCCAGAGCTTTCGGAGACTTTGCTCTTAAAGACCATGGCCTTATTGCTCTTCCCGACGTCTCCTACCGCCGTCTAACCTCCGACGACCGCTTCATCGTCCTCGCCACCGATGGGATCTGGGACGTGCTAAGCAACAACCAAGTAGCGTCGATCGTGTGGGCGGCGGAGAGCGAAGAAGCAGCGGCGAAAGCGCTGGTGGATGCGGCGGCGGAGGCTTGGAAACGCTACCCTTCTTCCAAACTCGACGACTGCACCGTCGTTTGCCTCTTTTTACAAACCCAACACCAGAGCGAAGATTGA 1020 49.02 MGICISTASSQIRHETEGGELVFQEDYGSVCGIQKLDSICSKQGSKGLNQDAAFFYQEYGEPDTALFGVFDGHGMNGHIVSNMVKNRLPWLLLGQRNAMSKNLDDDRDFQNHFDVRDGELVQSKNFVSWKESVVTAFKVMDKEIKLQENLDCSNSGSTAVIAVKQGEDLVIANLGDSRAVMGRITDEGIKAIQLTTDLKPGLPNEAERIRRCKGRVLALKEEPHIQRVWLPNEDSPGLAMSRAFGDFALKDHGLIALPDVSYRRLTSDDRFIVLATDGIWDVLSNNQVASIVWAAESEEAAAKALVDAAAEAWKRYPSSKLDDCTVVCLFLQTQHQSED 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3277745 3279730 - Lag0037082.1 Lac2g0444 597708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g0444 339 Gene3D - 37 334 IPR036457 -
Lac2g0444 339 CDD PP2Cc 38 331 IPR001932 -
Lac2g0444 339 SUPERFAMILY PP2C-like 38 332 IPR036457 -
Lac2g0444 339 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169(InterPro)
Lac2g0444 339 SMART PP2C_4 24 329 IPR001932 -
Lac2g0444 339 Pfam Protein phosphatase 2C 40 311 IPR001932 -
Lac2g0444 339 ProSiteProfiles PPM-type phosphatase domain profile. 36 331 IPR001932 -
Lac2g0444 339 PANTHER PROTEIN PHOSPHATASE 38 330 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0444 Lac-Chr2:3277745 Lac5g0625 Lac-Chr5:7426645 2.40E-83 dispersed
Lac2g0444 Lac-Chr2:3277745 Lac6g1670 Lac-Chr6:24678812 7.50E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g0444 - - - 0.0